Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0993 ATGGGGTTGAACAACAACAACAGAGTGGATCATTTTGATTGCCATGAAACCACTATCAGAATCCATAGCCACATGCCTCTGCAAATTCACTCAGTTTGTTTGCCTCCCCACCAAACCACACTTCAAAAACTAAAGCACAGGATCTCTGAGATATTCTTCCCTGATGATCCCTTCTACATATTCAAGAATCAAACTTGGTTCAGAAAATTTCTTCTCGCTATTCAATTTCTCTTCCCCATCCTCCAATGGGCGCCTCACTACAATCTCAGATTTCTTCGTTCTGATATCGTCTCTGGCCTCACCATTGCCAGCTTGGCCATTCCTCAGGGAATCAGTTATGCGAAGCTAGCAAATTTGCCACCCATAATTGGACTATATTCCAGCTTTGTGCCTCCATTGATATATTCTTTGCTTGGGAGCTCAAGACATCTTGGTGTTGGCCCTGTTTCAATTGCGTCTTTAGTTATGGGATCAATGTTAAGTGAATCAGTTTCTTATAGTCAAGATCCAATCCTCTATCTCAAATTGGCCCTTACTGCCACCTTCTTTGCTGGTGTATTCCAAGCTTCTCTGGGTATACTAAGATTAGGATTTATAATTGATTTCCTATCAAAAGCAACCCTGCTTGGTTTCATGGCTGGTGCAGCCATCATTGTGTCACTTCAACAACTTAAAGGGATACTTGGAATTGTGCATTTCACAAACCAGATGCAAATAGTTCCTGTTTTGACCTCTGTATTCAAACACACAAGTGAGTGGTCATGGCAAACCATTGCCCTGGGACTCTGCTTCCTCACCTTTCTTCTGACAACAAGACAAATTAGCTTGAAGAAACCAAAACTATTCTGGGTTTCAGCAGCTGCTCCCTTGACATCAGTTATTCTATCAACACTTTTGGTGTTCTGTCTCAGAAATAAAGCTCATGAAATTGCAATTATTGGCCACTTGCCAAAGGGCATTAATCCACCATCATCGAACATGTTATACTTTAATGGTCCATATTTGTCACTTGCTATCAAAACTGGGATTGTCACTGGAATATTGTCTCTCACTGAAGGAATAGCAGTGGGAAGAACATTTGCTACACTTCACAACTACCAAGTTGATGGAAACAAAGAAATGATGGCCATTGGTCTTATGAACATAGCTGGCTCTTGTTCTTCATGTTATGTCACAACAGGATCTTTCTCTCGATCGGCTGTTAATGTCAATGCTGGAGCAAAGACAACAGTTTCAAACATAATCATGGCTTCAGCTGTTCTAGTGACTCTTCTATTTCTGATGCCACTGTTTTATTACACACCAAACGTTGTCTTAGCAGCCATTATAGTGTCTGCTGTAATTGGACTAATAGATTTTCAAGCTGCATATAAATTGTGGAAGGTTGACAAGATTGACTTCTTAGCTTGTTTATGCTCCTTCTGTGGTGTGGTGCTCATCTCAGTACCCCTAGGCCTTGGCATAGCAGTGGGAATATCTATCTTCAAGATCCTACTTCATGTGTCTAGACCAAACACAGTGGTTTTGGGAAACATACCAGGAACACAGATTTATCATAACCTAAATCAATACAAAGAAGCTTCAAGGATTTCTTCATTTCTCATTCTGGCAATTGAGTCACCCATTTACTTTGCCAATTCAACTTACCTGCAAGAAAGAATACTGAGATGGGTACGAGAAGAGGAAGAGCGTGTAAAAGCAAACAAAGAAAGTGCATTGAAGTGCTTAATTTTAGACATGACAGCTGTTACAGCCATAGACACAAATGGGATTGACACACTATGTGAACTTAGAAAGATTCTGGAGAAAAGATCAATTCAGCTTGTGTTGGCAAATCCTGTTGGTAATGTGATGGAGAAGTTACATAAGGCAAAAGTTTTGGAATCTTTTGAAGAGAAAGGACTGTATCTCACTGTTGCAGAAGCTTTGGCTGCCATGTCAATTCCTTAA 1950 0.4036 MGLNNNNRVDHFDCHETTIRIHSHMPLQIHSVCLPPHQTTLQKLKHRISEIFFPDDPFYIFKNQTWFRKFLLAIQFLFPILQWAPHYNLRFLRSDIVSGLTIASLAIPQGISYAKLANLPPIIGLYSSFVPPLIYSLLGSSRHLGVGPVSIASLVMGSMLSESVSYSQDPILYLKLALTATFFAGVFQASLGILRLGFIIDFLSKATLLGFMAGAAIIVSLQQLKGILGIVHFTNQMQIVPVLTSVFKHTSEWSWQTIALGLCFLTFLLTTRQISLKKPKLFWVSAAAPLTSVILSTLLVFCLRNKAHEIAIIGHLPKGINPPSSNMLYFNGPYLSLAIKTGIVTGILSLTEGIAVGRTFATLHNYQVDGNKEMMAIGLMNIAGSCSSCYVTTGSFSRSAVNVNAGAKTTVSNIIMASAVLVTLLFLMPLFYYTPNVVLAAIIVSAVIGLIDFQAAYKLWKVDKIDFLACLCSFCGVVLISVPLGLGIAVGISIFKILLHVSRPNTVVLGNIPGTQIYHNLNQYKEASRISSFLILAIESPIYFANSTYLQERILRWVREEEERVKANKESALKCLILDMTAVTAIDTNGIDTLCELRKILEKRSIQLVLANPVGNVMEKLHKAKVLESFEEKGLYLTVAEALAAMSIP 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0993 649 Pfam Sulfate permease family 92 471 IPR011547 GO:0016020
Lele39g0993 649 SUPERFAMILY SpoIIaa-like 529 645 IPR036513 -
Lele39g0993 649 CDD STAS_SulP_like_sulfate_transporter 524 639 - -
Lele39g0993 649 Pfam STAS domain 524 642 IPR002645 -
Lele39g0993 649 ProSiteProfiles STAS domain profile. 523 646 IPR002645 -
Lele39g0993 649 TIGRFAM sulP: sulfate permease 79 642 IPR001902 GO:0016020|GO:0055085
Lele39g0993 649 ProSitePatterns SLC26A transporters signature. 121 142 IPR018045 GO:0008271|GO:0008272
Lele39g0993 649 PANTHER SULFATE TRANSPORTER 41 645 IPR001902 GO:0016020|GO:0055085
Lele39g0993 649 FunFam Sulfate transporter 31 503 648 - -
Lele39g0993 649 Gene3D STAS domain 503 647 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0993 Lele-ChrLele39 18740570 18746660 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0993 4 647 Inorganic Solute Cotransporters AT3G15990 73.137 0.0 989