Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0986 ATGATGGATCTGATTTCAGGTCTACCAGATGATGTGGCTATGGACTGTTTGGTTCGTGTTTCCTATGATCAGTTCCCCACCGTTGCGTCGGTTTGTAAGAACTGGAAGACGGAGATTGAGATGCCGGAGTTTCGCCGTCGACGGAGGGACACAGGTCATATGCAGAGACTCATCGTGATGGTTCAAGCGCGAGTCGATGAGGATAAACGCGTCAGTTCTTTCATGAAGGGTTCGGTCAACACTATTTACCGTTTGAGTGTGTTCGAGGCGAATTCGGGTCAGTGGAACGAGTTGCCGCCGCCTCCGGGTTTCTCTTGTGGGTTACCCATGTTCTGTCAAATAGCGGGTGTCGGATACGACTTGGTTTTAATTGGAGGGTGGGACCCGAACTCTTGGAAGTCTTCCAATTCCGTGTTTATTTACAACTTCATGTCGGCTAAATGGCGACGTGGGGCCGACATGCCGGGTGGGCCCAGGACTTTCTTCGCCTGCGCGTCTGATTCCGAGCGAGTAGTCTACGTGACCGGAGGGCATGACGATGAGAAGAATGCGTTGAGGTCGGCGTGGGCCTATGACGTGGCAAGAGATGAGTGGGTCGCACTTCCCGACATGGATAAAGAGAGGGATGAGTGCAAGGCCGTTTTGCACCGTCAAAGCGGGAAGATCCGGGTCATTGGCGGTTACTGTACGCAGATGCAAGGGCGGTTTGAGAGAAGCGCCGAAGCCTTTGATGTTGCCACGTGCAAGTGGGACCCGGTAGAAGAAGATTTCCTGGGATCTGCCACTTGCCCGAGGACCTGCGTGGGCGGTGTCGATGGAGGGAGAGTTTACATGTGCAGGGGCGGTGAAGTGGTTGTATTAGAGAGTGAAAAGTGGGAAGCTGTGGCGAAACTGCCATGTGAGATACGGGAAGTGGCGTACATGAGTTTGGGGGCGGAGGGGACGTTGTGGGTAATTGGATCAAGTGGGTATTCTGAACCGTACATGGGTTTTGTATTGGACCTTGAGAGTAACAGTTGGAGGAAGTTGGAAAGCCCAACGGGCCATACGGGCCACATCCAGTCGGGTTGTCTGTTGGAGATTTAG 1086 0.5331 MMDLISGLPDDVAMDCLVRVSYDQFPTVASVCKNWKTEIEMPEFRRRRRDTGHMQRLIVMVQARVDEDKRVSSFMKGSVNTIYRLSVFEANSGQWNELPPPPGFSCGLPMFCQIAGVGYDLVLIGGWDPNSWKSSNSVFIYNFMSAKWRRGADMPGGPRTFFACASDSERVVYVTGGHDDEKNALRSAWAYDVARDEWVALPDMDKERDECKAVLHRQSGKIRVIGGYCTQMQGRFERSAEAFDVATCKWDPVEEDFLGSATCPRTCVGGVDGGRVYMCRGGEVVVLESEKWEAVAKLPCEIREVAYMSLGAEGTLWVIGSSGYSEPYMGFVLDLESNSWRKLESPTGHTGHIQSGCLLEI 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0986 361 Pfam Kelch motif 115 155 IPR006652 GO:0005515
Lele39g0986 361 Pfam Kelch motif 171 204 IPR006652 GO:0005515
Lele39g0986 361 Gene3D - 44 357 IPR015915 GO:0005515
Lele39g0986 361 PANTHER OS02G0208700 PROTEIN 2 361 IPR044595 GO:0080037|GO:2000762
Lele39g0986 361 SUPERFAMILY F-box domain 2 54 IPR036047 GO:0005515
Lele39g0986 361 SMART kelc_smart 120 168 IPR006652 GO:0005515
Lele39g0986 361 SMART kelc_smart 171 218 IPR006652 GO:0005515
Lele39g0986 361 SUPERFAMILY Kelch motif 82 347 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0986 Lele-ChrLele39 18689473 18690558 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0986 8 198 Miscellaneous Gene Families AT4G33900 24.757 2.81e-07 50.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele44g0507 44 3894414 3896126 Lele39g0986 39 18689473 18690558 CCT
Lele41g0846 41 18175023 18179842 Lele39g0986 39 18689473 18690558 CCT
Lele42g0836 42 21269331 21273794 Lele39g0986 39 18689473 18690558 CCT
Lele39g0986 39 18689473 18690558 Lele39g0986 39 18689473 18690558 ECH
Lele37g0442 37 3617104 3618189 Lele39g0986 39 18689473 18690558 hybridization
Lele38g0409 38 3279995 3281077 Lele39g0986 39 18689473 18690558 hybridization