Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0983 ATGAACACAGACGAAACCGAGCTTCGAAGCCTTCTCTATCACTCTTCAGTTGAATTAGGATTCCGTTTCGAGACAATCGGACAGAAAGTCCTCTACAATCTACATTCTGTGGTGCTAAGTGTTGCAAGAATATTGGTTTTCTTCATCCAGCATATTAGAGTAGATTTATGCATGACCAGGAAACAAACTGCAAGAAGGAGGCTAAAGCCAGAAACCCATAATGGTCATCAGCACATAATTGACATTACAAGAAATAGTAATGACTTATCCAGCTCTACTCAAGATGAGCAACATCCTGAAATGCATTTGCCACATAATGGAGATCAGCCATCAGTTGGCGCACAAGTTCCCACTCACCAATCATCTTCATCTTCATCTAGGTTAAACTCTGTAAATTCCTCATCAACAAGAAGAGCCGAGGGATATGGTCATAACAGAAGAAGCCCGCTGAATTCCGGACTATGGATTTCTGTTGAGCTTGTTGTCACTGTGGGTCAGATCATAGCATCTATTGTTGTCTTGTCAATATCCAGGAATGAAAATCCCAAAGCTCCATTATTTGCATGGATTGTGGGTTATGCATCTGGTTGTGTTGCCACACTTCCTATTCTTTACTGTCGTTATCAAACCCGTAATCAAGGCATGGGACGAAATTTATCTCAACCATCGCAAGGTTCTTCTGGAAGCAATCCCCCAGAACGGACTTCTTATACTGCAATTTCTCTTGCTCATGTTTCAGATGAAGAGAATAGTCGTACTACAGAACCGGCTACAGGAAACACTGGGATTCCTGGAGCCTTTAGTTCTAGGTTTAATGGTTTAGTAGACCATTTCAAGATGGCCTTAGATTGCTTCTTTGCAGTTTGGTTTGTTGTGGGCAACGTTTGGATCTTTGGAGGTCACTCTTCTCCTTCTGATGCTCCAAAATTATATAGATTATGTATAGTGTTTCTTACCTTCAGTTGCATTGGATATGCTATGCCATTTATACTATGTGCAACAATTTGTTGCTGCCTACCTTGTATAATTTCTTTTTTGGGAATTCGAGAGGACTTTTCTCAAACTAGAGGAGCCACTGTTGAATCTATTAATGCCCTGCCTATATATAAGTTCAGTTTGAAGAAAAACGAAAATAGTGATGATGAGAATGGCAATACAGCTATAGATGAAGGAGGGACCTTGGCTGCCGGAACAGAAAAGGAGCGATCCATATCAGGAGAAGATGCTGTTTGTTGCATTTGCTTGGCAAAATATGCAGATGATGATGAGCTTAGGGAGCTACCCTGCTTCCATGTCTTTCATTGTACTTTCAGCAGAGGAGTCCAGTCAGCATTAGAGGAGAATGGTTGCCAAGTCAGCCACAGGTTTCCTTTAAGGGCAGGGTCATACATGTGGCCTGAAAGCTGA 1407 0.4165 MNTDETELRSLLYHSSVELGFRFETIGQKVLYNLHSVVLSVARILVFFIQHIRVDLCMTRKQTARRRLKPETHNGHQHIIDITRNSNDLSSSTQDEQHPEMHLPHNGDQPSVGAQVPTHQSSSSSSRLNSVNSSSTRRAEGYGHNRRSPLNSGLWISVELVVTVGQIIASIVVLSISRNENPKAPLFAWIVGYASGCVATLPILYCRYQTRNQGMGRNLSQPSQGSSGSNPPERTSYTAISLAHVSDEENSRTTEPATGNTGIPGAFSSRFNGLVDHFKMALDCFFAVWFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISFLGIREDFSQTRGATVESINALPIYKFSLKKNENSDDENGNTAIDEGGTLAAGTEKERSISGEDAVCCICLAKYADDDELRELPCFHVFHCTFSRGVQSALEENGCQVSHRFPLRAGSYMWPES 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0983 468 MobiDBLite consensus disorder prediction 79 97 - -
Lele39g0983 468 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 71 436 - -
Lele39g0983 468 SUPERFAMILY RING/U-box 405 435 - -
Lele39g0983 468 MobiDBLite consensus disorder prediction 65 146 - -
Lele39g0983 468 MobiDBLite consensus disorder prediction 111 139 - -
Lele39g0983 468 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 389 452 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0983 Lele-ChrLele39 18656528 18660476 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0983 73 434 C3H Transcription Factor Family AT1G80400 57.260 5.08e-144 416