Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0982 ATGGCTCTCGGACTTGAAATCACAGAGCTCAGGTTGGGTCTTCCCGGCGGTGGGGATGATCAGAACAAGACTGGTGAGGTGACCAAGAAGAGGTTCTTCTCGGAGATTGGCCGTGTCGATGGCGTTGCCACCGGTGGTGGTGGTGAGGATGAGAATAGCTGCTCTGGCGACCAGAAAACACAGGTGAAGAGCGCGGTGGTGGGGTGGCCGCCAGTGGGGTCGTACAGGAGGAGAAACAGCGTGAGTGATGGGTCGAAGGAGAAAATTTACGTCAAGGTTAGCATGGATGGAGCTCCTTTCTTGCGAAAAGTTGATTTAGGAATGCAAAAGGGCTACTCTGAGTTGGCTTCAGCCTTGGAGAAGCTCTTTGATTGCCACGGAATCGGAGAGGCATTGAAGGTTGTGGACAATTCTGAGGTCGTTCCCATTTATGAGGACAGAGATGGTGACTGGATGCTTGTTGGAGATGTCCCATGGGAAATGTTTATAGAGTCATGCAAGAGGCTGAGGATTATGAAGAGATCGGAGGCTAAAGGCTTTGATCTTCAGCCAAAAGGGTCTTTGAAGGGCAAAACCAAGTGA 582 0.5103 MALGLEITELRLGLPGGGDDQNKTGEVTKKRFFSEIGRVDGVATGGGGEDENSCSGDQKTQVKSAVVGWPPVGSYRRRNSVSDGSKEKIYVKVSMDGAPFLRKVDLGMQKGYSELASALEKLFDCHGIGEALKVVDNSEVVPIYEDRDGDWMLVGDVPWEMFIESCKRLRIMKRSEAKGFDLQPKGSLKGKTK 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0982 193 MobiDBLite consensus disorder prediction 40 60 - -
Lele39g0982 193 FunFam Auxin-responsive protein 83 184 - -
Lele39g0982 193 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 4 178 IPR003311 GO:0005634|GO:0006355
Lele39g0982 193 Pfam AUX/IAA family 52 180 IPR033389 -
Lele39g0982 193 SUPERFAMILY CAD & PB1 domains 79 173 - -
Lele39g0982 193 Gene3D - 82 185 - -
Lele39g0982 193 ProSiteProfiles PB1 domain profile. 88 176 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0982 Lele-ChrLele39 18640264 18642739 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0982 84 178 B3 DNA Binding Superfamily AT4G23980 42.105 2.90e-13 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele39g0982 AUX_IAA 6e-46 CL0072