Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0981 ATGTCGCCTGAGAGTACTGGAACCTCCCGCTGCTCCGCCCAGTCCGACGTCACCGAGTTGAACCTGAAGGAGACGGAGCTCACCCTCGGCCTTCCTGGCTCCAATAATATCCCTAGCTCTAAACGTGCCTTCTTGGAAACCACCGTCTTCAGCCCAACGTCGTCGTCAACTAGTACCCCAGCAACTAAGGCACAAGCAGTGGGGTGGCCGCCGGTGAGGGCGAGCAGGAAGAACGTGATGAGGAGCTGCAAGTACGTGAAGGTGGCGGTGGACGGAGCTCCATATCTGAGGAAGGTAGATCTTGAGAAGTACGAGAGTTATGATCAGCTGCTCACGGCTTTAGAGGCCATGTTTGGTTCCTTGACAATTCGCAATCATTTGAATGAGAGGAAGATGATGGACCTTGGGAATGGGGCGGAGTACGTGCCCACCTATGAGGACAAAGACGGTGACTGGATGCTCGTTGGAGATGTACCTTGGAAGATGTTTGTTGAATCCTGCAAAAGAATAAGGTTGATGATAAAGTCAGAGGCCAGTGGCCTAGAGATTGGAAGAACAGGGTTGAAGTTGGAGGAGAAAACGTGTGGGAATTAA 594 0.5219 MSPESTGTSRCSAQSDVTELNLKETELTLGLPGSNNIPSSKRAFLETTVFSPTSSSTSTPATKAQAVGWPPVRASRKNVMRSCKYVKVAVDGAPYLRKVDLEKYESYDQLLTALEAMFGSLTIRNHLNERKMMDLGNGAEYVPTYEDKDGDWMLVGDVPWKMFVESCKRIRLMIKSEASGLEIGRTGLKLEEKTCGN 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0981 197 Pfam AUX/IAA family 81 181 IPR033389 -
Lele39g0981 197 Gene3D - 78 187 - -
Lele39g0981 197 SUPERFAMILY CAD & PB1 domains 75 174 - -
Lele39g0981 197 FunFam Auxin-responsive protein 78 185 - -
Lele39g0981 197 ProSiteProfiles PB1 domain profile. 83 177 IPR000270 GO:0005515
Lele39g0981 197 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 20 180 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0981 Lele-ChrLele39 18632288 18633329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0981 87 184 B3 DNA Binding Superfamily AT4G23980 32.653 1.37e-09 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele39g0981 AUX_IAA 3.1e-46 CL0072