Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0953 ATGTTTAGGAGGAGACCTAGCATTTGTACTTACTTATATGTAGTTTCTCGTGAGTATGAACGAACGAAACTTTTCTCAAAGTGGGGTTTCAGCAATGAGCTAAGTGGCAAGCAAGAAAGCAAGAGAGAGAGTAAAGTTAGAGTGAAAAGCTTACCTTCTTTCTTCTTGTCAATTCTAAAATGGAAATCCAGGGACATCACCGTTCTTCATCTTCTTCATTGCAAATACCTAGCTGGTTGCTTCCAACACTTTGCAAAAGGCAAAATGAGCTATGCAAATTCTCAAATGGGCTCTGGTAGTAGAACTGCTAGAAGAAGTTTTGAGTTTGGGAAGACGCATGTGGTGAGGCCCAAAGGAAAACACCAAGCTACTATTGTTTGGCTGCATGGTCTTGGTGATAATGGTTTGAGCTCATCTCAACTCCTGGAATCCCTTCCACTCCCAAATATAAAATGGATTTGCCCTACCGCTCCGACCCGTCCTGTAGCAATACTTGGCGGTTTTCCTTGCACTGCATGGTTTGATGTTGGAGAACTCTCAGAGGAAGGTCCAGATGATTGGGAAGGCTTAGATGCCTCAGCTGCACATATTGCCAACTTGTTGTCAACAGAACCAGCTGATGTGAAAGTTGGGATTGGAGGCTTCAGCATGGGTGCAGCAACAGCCTTATATTCTGCTACTTGTTTTGCTATGGGTAGGTATTCAAATGGAATACCATATCCTCTTAACATTAGAGCAGTTGTTGGACTAAGTGGCTGGCTTCCAGGATCAAGGAGTCTGAGGAACAGGATTGAAGTGTCACATGAAGCCAGAAGGAGAGCTGCTTCATTACCCATTTTGCTGTGCCATGGAAACAATGATGATGTAGTTCTGTACAAATACGGAGAGAAATCAGCCCAATGCCTAAGTTCAGCCGGATTTCGATACATTACCTTCAAGTACTATGATGGTCTTGGTCATTACACAGTTCCTAGAGAGATGGATGAGGTCTGTAATTGGCTTAACTCAAAGCTTGGGCTTGATGGAACCTCATAA 1035 0.4338 MFRRRPSICTYLYVVSREYERTKLFSKWGFSNELSGKQESKRESKVRVKSLPSFFLSILKWKSRDITVLHLLHCKYLAGCFQHFAKGKMSYANSQMGSGSRTARRSFEFGKTHVVRPKGKHQATIVWLHGLGDNGLSSSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSEEGPDDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAATALYSATCFAMGRYSNGIPYPLNIRAVVGLSGWLPGSRSLRNRIEVSHEARRRAASLPILLCHGNNDDVVLYKYGEKSAQCLSSAGFRYITFKYYDGLGHYTVPREMDEVCNWLNSKLGLDGTS 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0953 344 SUPERFAMILY alpha/beta-Hydrolases 113 338 IPR029058 -
Lele39g0953 344 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 61 343 - -
Lele39g0953 344 Pfam Phospholipase/Carboxylesterase 112 335 IPR003140 GO:0016787
Lele39g0953 344 Gene3D alpha/beta hydrolase 103 339 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0953 Lele-ChrLele39 18377264 18380997 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0953 89 342 Acyl Lipid Metabolism Gene Families AT5G20060 66.142 9.89e-131 372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g0807 42 20968286 20981595 Lele39g0953 39 18377264 18380997 CCT
Lele39g0953 39 18377264 18380997 Lele41g0797 41 17728328 17731481 CCT
Lele39g0953 39 18377264 18380997 Lele42g0786 42 20811183 20815091 CCT
Lele39g0953 39 18377264 18380997 Lele43g0603 43 5392513 5395573 CCT
Lele39g0953 39 18377264 18380997 Lele44g0557 44 4344107 4347383 CCT
Lele39g0953 39 18377264 18380997 Lele40g0415 40 3418491 3421283 ECH
Lele39g0953 39 18377264 18380997 Lele39g0953 39 18377264 18380997 ECH
Lele37g0473 37 3908776 3911617 Lele39g0953 39 18377264 18380997 hybridization
Lele38g0441 38 3591895 3595440 Lele39g0953 39 18377264 18380997 hybridization