Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0949 ATGTGTGATTTGAGTGATCGCAGCCATATTAAGAGGCCTCACAGAGCGAACCAACCTGCTTGGAAAGCAATAAAGCAGCTCTGTTCTGAGCACGGTGGAGTTAGACTCGACCACTTCCACCTCCTTCGCCAGCTTGGCTCCGGCGATGTTGGCAACGTGTTCCTCTGCGAGATCAAGCACACAATGATGAAGAACGGTGGTGGTGGTTACTTTGCATTGAAAGTTGTGGATAGAGAGTGTCTGAGAAAGAAAAATAAGCTCAAGAGAGCTGAGGCTGAGAGACAAGTTTTGGGTGTTCTTGATCACCCTTTTCTTCCAACCCTATATGCTAACTTCGATGCTTATCACTACTCCTGTTTGCTCATCGATTACTGCCATGGCGGTGACTTGTTCCGGCTTCAACAGAACCAGCCAACTCTTCGTTTTAGCGTCTCAACTGCTAAATTCTATGCAGCTGAGGTGCTTGTAGCTCTAGAATATCTGCACATGATGGGGATAATTTACAGAGACCTAAAGCCAGAGAACGTTCTTATTCAAGAAGATGGCCACGTCATGCTCTCCGACTTCGATCTCTCACTACTTCACTGTGAGGCTCATCCCAAGCTTCTGAAACACGACATCACTGCAACAACAACGAAGAAGAAGCATGCAACTTTCTGTTGTACTGAAAACTCAGTGGAGGGTGGTGCCATAATCAGAAGGAGGAAGAAGAAGAAAGCATCCTTCATAGCTGATGATGACGTGGAGTTATCCGTAGAACCAATGATCGCAAGATCCAACTCATTCGTTGGGACCCACGAGTATTTAGCACCAGAGATGATATTAGGTTTAGGACACGGGAGTGGAGTGGATTGGTGGGCCTACGGGGTGTTTGTGTACGAGCTGTTGTATGGGATCACACCTTTCAAAGACAAAAACAAGGAGAAGACAATGAGGAACATTATAGGGAAGTCGTCGGTGAGGTTTCCGACAAGTGAGTTCAGAGACAAAGAAGAAGACGATGATGGGGAAGAAGAGATAGCGAAGGCACAAGATCTCATAAAACAGCTTCTGGTGAAGAATCCTAAGAAGAGACTAGGATCTACGAGAGGGTCTTGTGAGATTAAGAGACATGGATTCTTCGAAGGCACGAACTGGGCCTTAATTAGATCGAAGAAACCACCTCTTGTCCCTAAACAAGATGTAGCAGTATTAGCAGAGAACTTGGTCAAGGAGAAAGCTACCATCAATATCCCTCCGAAGATTGATTTCTTCTGA 1257 0.4574 MCDLSDRSHIKRPHRANQPAWKAIKQLCSEHGGVRLDHFHLLRQLGSGDVGNVFLCEIKHTMMKNGGGGYFALKVVDRECLRKKNKLKRAEAERQVLGVLDHPFLPTLYANFDAYHYSCLLIDYCHGGDLFRLQQNQPTLRFSVSTAKFYAAEVLVALEYLHMMGIIYRDLKPENVLIQEDGHVMLSDFDLSLLHCEAHPKLLKHDITATTTKKKHATFCCTENSVEGGAIIRRRKKKKASFIADDDVELSVEPMIARSNSFVGTHEYLAPEMILGLGHGSGVDWWAYGVFVYELLYGITPFKDKNKEKTMRNIIGKSSVRFPTSEFRDKEEDDDGEEEIAKAQDLIKQLLVKNPKKRLGSTRGSCEIKRHGFFEGTNWALIRSKKPPLVPKQDVAVLAENLVKEKATINIPPKIDFF 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0949 418 ProSiteProfiles Protein kinase domain profile. 39 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0949 418 FunFam Serine/threonine-protein kinase OXI1 129 197 - -
Lele39g0949 418 PANTHER FLIPPASE KINASE 1-RELATED 8 397 - -
Lele39g0949 418 Gene3D Transferase(Phosphotransferase) domain 1 257 392 - -
Lele39g0949 418 Coils Coil 73 93 - -
Lele39g0949 418 SMART serkin_6 39 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0949 418 Pfam Protein kinase domain 39 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0949 418 Pfam Protein kinase domain 259 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0949 418 Gene3D Phosphorylase Kinase; domain 1 37 124 - -
Lele39g0949 418 Gene3D Transferase(Phosphotransferase) domain 1 125 222 - -
Lele39g0949 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Lele39g0949 418 SUPERFAMILY Protein kinase-like (PK-like) 35 399 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0949 Lele-ChrLele39 18359402 18361158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0949 12 396 AGC Kinase Gene Family AT2G26700 48.747 5.30e-136 398
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lele39g0949 Pkinase 1.6e-32 CL0016