Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0942 ATGAAGAAGCACGATGGGGGGAGCTCAATGGGAAAGAATGGGATGATGAATGAAGTGATGGATGATGGGAAAGAAGTACGAAAAAGGAGTGAAAAAAGGGGTAGGAGCGGCGGACAATTAATGCTAACATTGGATGAAGCAATGGAGGAAAGGTTGGAAGGAGTAAACATTGTGAGAGACGTTGGGGATGAAAACAAGTTGACTTTGGGCCAAAATAGTGGATCATTGGAAGGAAGAGGGACTAATACGCAGGAAAGCCAACAAAGAGATTTTGGGCCAAGTCCAATTCAGGTGGTTGGAAGCAGGTTGTTTATTTTGAATTGCAAAATGTACGGGAGAAAAGCGTGCCAACTTGTTAAAGAGGTAGCGAGTGGGGAGAAAGGCCAATTGACTCCATTCAATAGCGATCTATTTGAACAAGTAGTTGCAGAATGCACTCAACATCACCTTGAGCTTCAGTCCTTGATAAGAAAGATGCAGGTAGAAGGGTTGGATGTTCAAACAACTAGAAATGCGGAACACCACGGCGCACTTATCCACCATCTTTCTTTAGTTCGCAATAAACGCTGCTTAATGGCCTATGTTTACAATCGAGCAGAGACAATACAGAGTTTGTTATGGAAAATTGGACATGTACTTCCTCAAGAAATTGAGGAGAAACTTTGTCATACGGAAGTAGAGTATTTTAAGAAGCATTCTGCGGCTTTGAAATCATATATGTCAAAAGTGCAACTTGATCTGACTGTGGATATGGTGCCGCCCAAAGATCCCTACATCAAAGTGAGGGTTCTCGAAGATATTGGTGATGGGATTGTGCTTAGCGATGACAAGACTGCCAATTTTGCCCGCCATTCAATGCATTTTCTGAAGCGAACTGACGCTGAGCAATTTATCTCACGGGGCTTAATGGAGGAGCTCACAGGCTGA 927 0.4326 MKKHDGGSSMGKNGMMNEVMDDGKEVRKRSEKRGRSGGQLMLTLDEAMEERLEGVNIVRDVGDENKLTLGQNSGSLEGRGTNTQESQQRDFGPSPIQVVGSRLFILNCKMYGRKACQLVKEVASGEKGQLTPFNSDLFEQVVAECTQHHLELQSLIRKMQVEGLDVQTTRNAEHHGALIHHLSLVRNKRCLMAYVYNRAETIQSLLWKIGHVLPQEIEEKLCHTEVEYFKKHSAALKSYMSKVQLDLTVDMVPPKDPYIKVRVLEDIGDGIVLSDDKTANFARHSMHFLKRTDAEQFISRGLMEELTG 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0942 308 SUPERFAMILY GINS helical bundle-like 110 255 IPR036224 -
Lele39g0942 308 CDD GINS_A_psf1 112 245 IPR005339 GO:0000811|GO:0006260
Lele39g0942 308 Pfam GINS complex protein 178 225 IPR021151 -
Lele39g0942 308 PANTHER PARTNER OF SLD5 110 307 IPR005339 GO:0000811|GO:0006260
Lele39g0942 308 Gene3D - 110 243 - -
Lele39g0942 308 MobiDBLite consensus disorder prediction 1 38 - -
Lele39g0942 308 MobiDBLite consensus disorder prediction 66 93 - -
Lele39g0942 308 MobiDBLite consensus disorder prediction 18 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0942 Lele-ChrLele39 18317865 18326207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0942 110 308 Core DNA Replication Machinery Family AT1G80190 70.297 8.79e-103 297