Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0928 ATGAGCTTATACACAAGTGGAACCTTGTTTATCCATGTGTTTTTTCTGCTAAGAGTGTGTTTTGCCGACCATCAACAATACATAAGCAAGATTTATCCCAGATTCGAGGCATCTCAGCTGGATTGGAATGACCATGGTGGATTGTTCTTACTATCAAACAACTCGGTTTTCGCCTTTGGATTCTTCGGTACACTCGATGTTTCCTCGTTTGTTTTAGTTGTCATTCACATGAAAAGCTATAAAGTTGTTTGGACTGCTAACAGAGGCTTACTGAACTGGTGGAAATGTCCTTCACTTCTCAAATCTCGTTTCAATTGCAAGCCTCCGAACGCGAACACTTCCACCTCATCATCATGTTCCTCTAGAACTCAACAAGACCTCGTTTATGTCGGTGAAAAACTCGATTACTTCGCCCTCAAGTATGTTCAGCAGGTTTCTAAACCATCATCCCTGAGTGCTTGTAAAGAAGGTTGCTTAAGAAACTGTTATTGCCTTGTGCTTTTCTTTGAAAACAGTACAGGAAAATGCTACCATTTTGATCAAACAGGGAGTTTCCAACGCTCTAAGGCAAGTTCTGGAGGCTATCTTTCATTCATCTCTATTGAAGAAGATGGAGATGGAAGAAAAAGAAGGAACCCGAATCCGACGGTACTAGTCGTTGTTGAAGCTATTTTCACAATTCTGATTATTATTGGACTTGTTTTGGGGTTCAGGATTTACTACAGAAATAAGAATCTCTTGGAGGATTCTCCAGAAACATTTGAGGAAGATGATTTCTTGGACAGTCTTCCTGGTATGCCGACTCGTTTTAGTTATAGTACTCTAAGTAAAGCCACCAAGAATTTCTGTACAAAAATTGGTGGAGGAGGGTTTGGTTCCGTTTATCTAGGAGTTCTTGAAGATGGATCTCAATTAGCTGTGAAGAAACTTGAAGGATTAGGGCAAGGGGCAAAAGAATTCAAGGCTGAAGTTTCCAGCATTGGAAGTATTCACCATATTCATCTGGTTAAGCTGAAGGGCTTCTGCGCGGAAGGCCCTCATCGCCTTCTTGTGTACGAATACATGCCAAGAGGCTCTCTGAACAAATGGATCTTTAAAAACAAGATTCAACATTGCATTAGGTACACCAAGAGGAGTAGCCTATCTTCACGAGGAGTGTGA 1161 0.4109 MSLYTSGTLFIHVFFLLRVCFADHQQYISKIYPRFEASQLDWNDHGGLFLLSNNSVFAFGFFGTLDVSSFVLVVIHMKSYKVVWTANRGLLNWWKCPSLLKSRFNCKPPNANTSTSSSCSSRTQQDLVYVGEKLDYFALKYVQQVSKPSSLSACKEGCLRNCYCLVLFFENSTGKCYHFDQTGSFQRSKASSGGYLSFISIEEDGDGRKRRNPNPTVLVVVEAIFTILIIIGLVLGFRIYYRNKNLLEDSPETFEEDDFLDSLPGMPTRFSYSTLSKATKNFCTKIGGGGFGSVYLGVLEDGSQLAVKKLEGLGQGAKEFKAEVSSIGSIHHIHLVKLKGFCAEGPHRLLVYEYMPRGSLNKWIFKNKIQHCIRYTKRSSLSSRGV 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0928 386 ProSiteProfiles Protein kinase domain profile. 280 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0928 386 SUPERFAMILY Protein kinase-like (PK-like) 262 372 IPR011009 -
Lele39g0928 386 FunFam serine/threonine-protein kinase PBS1-like 249 354 - -
Lele39g0928 386 Gene3D Phosphorylase Kinase; domain 1 252 354 - -
Lele39g0928 386 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 96 379 - -
Lele39g0928 386 ProSitePatterns Protein kinases ATP-binding region signature. 286 309 IPR017441 GO:0005524
Lele39g0928 386 Pfam PAN domain 140 189 IPR003609 -
Lele39g0928 386 Pfam Protein tyrosine and serine/threonine kinase 283 368 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0928 Lele-ChrLele39 18207000 18208804 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0928 216 371 Receptor kinase-like Gene Family AT1G56120 41.509 8.08e-26 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele39g0928 PK_Tyr_Ser-Thr 3.6e-12 CL0016