Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0915 ATGGCAGAAGTTTCTCTCAACATTGAACCAGTAGTAGATGATGATGCTGATGGATTTGAGATTGAAGAGGATTGTGGAATGGCAGAATTTGTCAGTCAAACTGGCATAATCCAAGGGGAGGACCCACTTTCTCCTGCTGTTGGAATGGAATTTGAGAGGATGAAGAGCAAGGAACGGTACAGAGGAAAACTCAGCTGCAGTAGTGCTGGGTTCAAGAAAAAAAGTGAAGCAAATCGCCCAAGACCTGAAACAAGAACTGGTTGTCCAGCAAAGATAGAGTTCGGGCTGATGGATTCCAAAAGATGGAGAATTATAGAAGTGGAGCTTGAGCATATTCACTTGATAAACCCAACAAGTGGATTCTACAAATCTCATAAGCGCCTAGGTTTGGGGACCAAAAGAGCGTTGCAATTAGACATTACTGAAGAAGTCTCAAAATTGTCCGCAAATGAACTATTCAGGATGTTTGAAAGGGGAATAAAAGGAATGTTCTCATGTTTAAGCCCCAGACAGATAAATGTGGATGGGCCAGTGATCTCATACCTCATCAAAGAACAAGTTGAAGCTGAAGGAAATCAGAGAATTACAAGAGATTATGAGGTGAATTACAACGGTTCTGAAATGGAGGTCCTTTGCATTTGTGGTTTGTTCAACTTGAAAGGAATCTTGTGTAGGCATGCACTATCTGTGTTAAACCAGAATGGTATGGAAGAGGTTCCTGCTCAGCATATTCTCTCAAGATGGAGAAAAGATATGAAGCGAAGTTATGTTATTGATCAGAAATCTAGTGGCATTGATAGTAATAACCAAGTTCATAGAGCTTTGGCGCGCTTTAGCCTTTCTTATTCCAGCGAAGAAGCCATCGCCTCTTTCTATCCCAAGTTCAAGGCTTTTCTCACGGAAAATGGAGTGACTCTTTTGGAGAAGAGGTTCCTGCCAGCACTCGACAAGATGGGAAAGATATGTCACCTCTACCTCACAAGAGATCATGCCATGTTCCTTCACAACCTCCTTAATGGCGATGGTATTCAATCTATTGCTCAATTTCGCAAAGAAGCCCTTTTCGATGACTATCGCATCTCCAGCCAGAACGAAGATCGCATTGCTTTTACCATAGATGTCACTCTTCTCCATCGTGCGGTTCGTAGCAGTGTGAGCATTTGTTCTGAACTTGGTGGCAGTGGAGTTACTGATAATCGTCTCCAAATTAAATTGGTGAAAAAGCTACCTCCAAATTGTACCCAACCTATGCCTTTTCTTACCTTTGAAACCAAAGGTTATAAATCTGCAGTTATTCAGGATATCCCAATTTCAAAGCCATTATCAAGAGCTCAAGTTCTTGAACTTCAAGCGGCTTTGGATATGGCCCAAGACCTGCCTCAAACTCTAGTTCAGGTGCCAGATTTGAACCAATTGCAGAACTTTGTGGATAGGTTGAAGCAGGTGGGTGATGTGCTTAGTGTCTCCATAAGCAAGTATGGGGATTTGCACATACAGGTTTCAACAACACTGATCACTCTCGGTGCCGAGTTTCGGAAATTGTTGGTCATTGGGGAGAAAGCAGATGCCCCTTCTGAAGATCAAAATCTGAGTGCTCAGACTCGGTCATCCCGGTCAGTTGCCAGAGGAGATGCCCGATCTGTGCAAGTGAGTGTGAAGCACTTTGCCAAGGGCCTTCAGTGTCACTTGACCAAACCAGATTGTGCTTTCTATGGGATTTCTCCACTTGATGCTTGTTTGACAGTTATATTTCAGTTTTTCATTCCTGGTTCTCGTCAGACCGATAAGTCAATTAGCTTGCACTGCAGACTTCCTGTACTTGACCCTGGCTGTTGA 1836 0.4314 MAEVSLNIEPVVDDDADGFEIEEDCGMAEFVSQTGIIQGEDPLSPAVGMEFERMKSKERYRGKLSCSSAGFKKKSEANRPRPETRTGCPAKIEFGLMDSKRWRIIEVELEHIHLINPTSGFYKSHKRLGLGTKRALQLDITEEVSKLSANELFRMFERGIKGMFSCLSPRQINVDGPVISYLIKEQVEAEGNQRITRDYEVNYNGSEMEVLCICGLFNLKGILCRHALSVLNQNGMEEVPAQHILSRWRKDMKRSYVIDQKSSGIDSNNQVHRALARFSLSYSSEEAIASFYPKFKAFLTENGVTLLEKRFLPALDKMGKICHLYLTRDHAMFLHNLLNGDGIQSIAQFRKEALFDDYRISSQNEDRIAFTIDVTLLHRAVRSSVSICSELGGSGVTDNRLQIKLVKKLPPNCTQPMPFLTFETKGYKSAVIQDIPISKPLSRAQVLELQAALDMAQDLPQTLVQVPDLNQLQNFVDRLKQVGDVLSVSISKYGDLHIQVSTTLITLGAEFRKLLVIGEKADAPSEDQNLSAQTRSSRSVARGDARSVQVSVKHFAKGLQCHLTKPDCAFYGISPLDACLTVIFQFFIPGSRQTDKSISLHCRLPVLDPGC 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0915 611 Pfam Hus1-like protein 294 591 IPR007150 GO:0000077|GO:0030896
Lele39g0915 611 Gene3D - 294 591 - -
Lele39g0915 611 SMART 26again6 210 237 IPR006564 GO:0008270
Lele39g0915 611 FunFam Checkpoint protein 293 591 - -
Lele39g0915 611 ProSiteProfiles Zinc finger SWIM-type profile. 199 235 IPR007527 GO:0008270
Lele39g0915 611 PANTHER MITOTIC AND DNA DAMAGE CHECKPOINT PROTEIN HUS1 294 593 - -
Lele39g0915 611 Pfam FAR1 DNA-binding domain 54 116 IPR004330 -
Lele39g0915 611 Pfam SWIM zinc finger 199 232 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0915 Lele-ChrLele39 18114332 18118624 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lele39g0915 Hus1 1.7e-70 CL0060