Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0892 ATGATCGAGCCTTCCGTGAAGGGCACTGCTAATGTCCTCAAGGCTTGTCTTGAAGCACAAGTGTACCAGCTGTCTTTTACTGCAGAAGAACAAAGGTGTGAACTTCTGTCACTTGCGAGCTTATGGCAGAGATGCAGGCTCTGGATTTTGCCAGAAACACTGGTCACCCATTGTATACTGAATTCTGATGCCTCATTGTTTTATACGGTAGACACAAGTCTTGAGTCCATGGAGAATAAACAACGGTGGATAGTAGATGTGCGTGATGTAGCTGATGCAATACTGATGGCTTATGAGGAACCTGAGGCACAGGGCAGATACTTGTGCATTGCACATTCTATCAAGACATATGACTTGGTGGAGAAAGTAAGGAGCATATACCCACACTATAGCTACCCTACAAACTTCGTAGAATTAGATGATGACGTAAGGATGAGCACAGAGAAACTGCAGAGGTTGGTTTGGAGATACAGGCCACTGGAAGAAACAGTTGATTCTGTTGAGAGCTATAAGGCTGCTGGGCTCCTGGAATCTAACCATGTTGAAAATGAAAGTTGCGAGGACAAGGAAATGGCAGGCGCAGGGGCGAAGGTTTGCGTAACTGGTGCTGGAGGCTTTCTTGCGTCTTGGCTCGTTAAGCTTCTTCTCTCCAAACGTTATTTTGTTCATGGCACCGTCAGAGAACCTGGTAATCCGAAGTATGATCACTTACTTAAATTCGAGGGAGCTTCTGAGAACCTTAAGCTCTTCAAGGCTGAACTCTTAGATTACGAGTCTCTTTCTTCGGCGATTGCTGGTTGTAGAGCAGTTTTCCATGTTGCTTGTCCTGTGCCTTCTACAACTCTATCCAATCCTGAGGTAGAAATGATTGAGCCTGCTGTTACGGGCACTACTAATGTCCTCAAAGCTTGTCTTAAAGCAAAAGTAGAACGTGTTGTCTTTGTATCTTCTCAATCCGCTGTTTCCATGAACCCTAACTTGCCCAAGGATGGAATAATCGATGAATCCTGTTGGACTGATAAAGAGTACAGCAGAAGAACAAAGAACTGGTATTTTTATGCGAAGACAGAGGCAGAGTTACAGGCCCTGGATTTTGCCAGAAATACTGGGCTCTCACTGGTAACTATTTGTCCTACCGTGGTGTGGGGGCCAATTTTGCAGGTGGCATCCACAGTCAATGCAAGTAGCTTGGTTCTCCTCAAGCTATTTAAAGGTCTTGACTCACTGGAGAATAAACAGCGTTGGATGGTAGATGTGCGTGATGTAGCTGATGCAATACTGATGCTTTATGAGAAGCCTGAGGCAGAGGGCAGATACATATGCACTGCACATTCTATCATGACAAATGACTTGGTGGAGAAATTAAGGCGTATATACCCAAACTATAGCTACCCTAAAAAATTTGTTGAAGTAGATGATTGTATGAAGTTGAGCTCAGAGAAACTGCAGAGGTTGGGTTGGAGATACAGGCCATTGGAAGAAACACTAAATGATTCTGTTGAGAGCTATAAGGCCGCTGGGCTTCTGGAATCAAAATAA 1539 0.4438 MIEPSVKGTANVLKACLEAQVYQLSFTAEEQRCELLSLASLWQRCRLWILPETLVTHCILNSDASLFYTVDTSLESMENKQRWIVDVRDVADAILMAYEEPEAQGRYLCIAHSIKTYDLVEKVRSIYPHYSYPTNFVELDDDVRMSTEKLQRLVWRYRPLEETVDSVESYKAAGLLESNHVENESCEDKEMAGAGAKVCVTGAGGFLASWLVKLLLSKRYFVHGTVREPGNPKYDHLLKFEGASENLKLFKAELLDYESLSSAIAGCRAVFHVACPVPSTTLSNPEVEMIEPAVTGTTNVLKACLKAKVERVVFVSSQSAVSMNPNLPKDGIIDESCWTDKEYSRRTKNWYFYAKTEAELQALDFARNTGLSLVTICPTVVWGPILQVASTVNASSLVLLKLFKGLDSLENKQRWMVDVRDVADAILMLYEKPEAEGRYICTAHSIMTNDLVEKLRRIYPNYSYPKKFVEVDDCMKLSSEKLQRLGWRYRPLEETLNDSVESYKAAGLLESK 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0892 512 FunFam NAD(P)-binding Rossmann-fold superfamily protein 191 510 - -
Lele39g0892 512 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 165 IPR036291 -
Lele39g0892 512 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 194 504 IPR036291 -
Lele39g0892 512 CDD FR_SDR_e 198 487 - -
Lele39g0892 512 Gene3D - 52 188 - -
Lele39g0892 512 Gene3D - 189 512 - -
Lele39g0892 512 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 78 165 - -
Lele39g0892 512 Pfam NAD dependent epimerase/dehydratase family 198 436 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0892 Lele-ChrLele39 17844835 17851538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0892 196 510 Monolignol Biosynthesis Gene Families AT2G33590 62.025 1.74e-140 405