Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0888 ATGAGTAATTTTCTTGTTATGTTCCTGCTCATTTGGGTATCAAGCTTTTCTCTTCCAGTTTTTCATTTTTTCGCAAATGCTCAAGCTGAATCTCCAGAAGCTGTAAAAGGGGTGTCACTTAGCCCTGTTGATGTTAAATTTAATTACTCAAAAATGGTAGACAAGAAGAGTTCAATTGCTATATTTGACTTTCAATTGTTAGAGGTTGCAACAAACAGCTTTGACAAAAGTAATATTCTCGGTGAGAGTGGTTCTAGGCTAGTGTACAGAGCTTGTTTTGATGAGCATCTCAAGGCAGCTGTGAAGAAAGCAGATAGCAGTGCTGATAGAGAATTTGAGGTTTCTTGGCCTAGTCATGGATCGTCTTTAAATTGGCACCTTCGGTTAAAGATCGCCGTTGATGTTGCCAGGGCATTAGAATATCTCCATGAGCACTCTAATCCTCCTGTGGTTCATAGAAATCTACAATCTTCTAATGTTCTTCTGGATTCTCACTTTAATGCCAAGCTATCAGATTTTGGGCTTGCTATAAGTTCTGTAATGCAAGACAAGAACATAAAGATGTCGGGAACTTTGGGTTACGTAGCACCTGAGTACATATCACATGGAAGAAAAGCCATGGACAAGATGTCTTCAGATCAATACCAATCCATTGTCACATGGGCCATGCCTCAGCTAACTGACAGATCAAAGCTTCCAAGTATTATAGATCCTGTAATGAGAAACACAATGGATTTGAAGCATTTATATCAGATTGCTGCAGTGGCTGTACTTTGTGTACAAGCAGAACCAAGTTATCGGCCACTAATAACCGATGTCCTGCACTCTCTCATCCCTTTGGTACCGACGGAGCTAGGAGGGTCGCTCAGAGTTTCAGAATCAGTCTGCTCCGAGAATTTGCAATGA 906 0.4073 MSNFLVMFLLIWVSSFSLPVFHFFANAQAESPEAVKGVSLSPVDVKFNYSKMVDKKSSIAIFDFQLLEVATNSFDKSNILGESGSRLVYRACFDEHLKAAVKKADSSADREFEVSWPSHGSSLNWHLRLKIAVDVARALEYLHEHSNPPVVHRNLQSSNVLLDSHFNAKLSDFGLAISSVMQDKNIKMSGTLGYVAPEYISHGRKAMDKMSSDQYQSIVTWAMPQLTDRSKLPSIIDPVMRNTMDLKHLYQIAAVAVLCVQAEPSYRPLITDVLHSLIPLVPTELGGSLRVSESVCSENLQ 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0888 301 Gene3D Transferase(Phosphotransferase) domain 1 117 284 - -
Lele39g0888 301 ProSiteProfiles Protein kinase domain profile. 1 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0888 301 PANTHER OS01G0750732 PROTEIN 39 113 - -
Lele39g0888 301 SUPERFAMILY Protein kinase-like (PK-like) 51 277 IPR011009 -
Lele39g0888 301 Pfam Protein kinase domain 130 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0888 301 Gene3D Phosphorylase Kinase; domain 1 41 116 - -
Lele39g0888 301 FunFam Os07g0541700 protein 112 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0888 Lele-ChrLele39 17824731 17828219 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0888 56 281 Receptor kinase-like Gene Family AT3G58690 35.216 1.04e-54 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Lele39g0888 Pkinase 2.5e-16 CL0016