Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0885 ATGGCAGGAGGCAGCCTCGACGAGATCAAGAAGGAGAATGTCGACCTCGGGCAACCACCAGATTGGCAAGATTTCGTGGGAATTGTGGCATTGCTCATCATAAACTCAACTATTAGTTTCATTGAAGAAAACAATGCAGGTAATGCTGCAGCAGCACTTATGGCAAGCCTTGCATTGAAAACTAAGGTTTTGAGGGACGGAAAGTGGACTGAGCAGGATGCATCTGTGTTGGTACCTGGAGACATAATCAGCGTCAAATTAGGAGACATTATACCTGCAGATGCTCGTCTCTTGGAAGGAGACCCTTTAAAGATTGATCAGTCTGCACTTACTGGTGAGTCTTTGCCTGTTACCAAGAACTCGTCCGATGAAGTCTTCTCGGGATCGACTGTGAAGCAAGGAGAGATCGAGGCTGTTGTGATTGCTACTGGGGTTCACACCTTCTTTGGTAAAGCTGCTCACTTGGTTGATAGCACTAACCAAGTAGGCCACTTTCAGAAGGTGTTGACTGCCATTGCCATTGAGGAGCTGGCTGGGATGGATGTTCTATGCAGTGACAAGACAGGCACCTTAACGCTCAACAAGCTCACAGTTGACAAGACCTTGATTGAGGTCTTTGTAAAAGATATTGACAAGGACACTTTGATGTTGCTTGGAGCTAGAGCCTCAAGGGTGGAGAATCAAGATGCTATTGATGCTTGTATTGTTGGAATGTTGGGTGACCCAAAGGAGGCCAGAGATGGCATTACAGAGGTGCATTTCCTTCCCTTTAATCCAGTGGACAAGCGTACGGCCATAACATACATTGACTCTGCAGGCAATTGGCACAGAGTAAGCAAGGGAGCACCAGAACAGATTGTAGAACTCTGCAATGTCAAAGAAGATATAAAGAAAAAAGTTCATTCCATTATTGATAAGTTTGCTGATCGTGGTCTGCGTTCTCTTGCTGTTGCAAGACAAGAAGTGCCAGAAAAGAACAAGGAGAGTCCAGGAGCACCATGGCAGTTCGTGGGTCTCTTACCACTTTTCGATCCTCCAAGGCATGATAGTGCAGAGACCATCAAACGCGCTCTTCATCTTGGAGTGAATGTGAAGATGATCACTGGTGATCAACTAGCTATCGGGAAGGAGACTGGCCGTAGGCTTGGCATGGGAAGCAACATGTATCCTTCTTCCTCCCTTCTTGGTGAACACAAGGATGAGTCTATTGCTGCGCTTCCAATTGATGAGCTTATTGAGAAGGCTGATGGCTTTGCTGGCGTCTTTCCTGAGCACAAATATGAGATAGTGAAGAGACTACAAGATAGGAAGCACATCTGTGGAATGACTGGGGATGGTGTGAATGATGCTCCTGCATTGAAAAAGGCAGATATTGGGATTGCAGTGGCTGATGCAACCGATGCAGCTCGAAATGCATCTGACATAGTTTTGACAGAACCTGGTTTAAGTGTGATTATCAGTGCAGTGTTGACAAGCCGTGCCATTTTCCAAAGAATGAAGAATTACACCATCTATGCAGTTTCTATCACAATTCGAATCGTGTTGGGCTTTCTCTTGCTTGCTCTTATCTGGAAATTTGATTTCTCACCTTTTATGGTTCTGATCATTGCCGTACTAAATGATGGGACCATCATGACCATTTCTAAGGATAGAGTCAAGCCATCACCTTCTCCAGATTCATGGAAACTCAATGAAATTTTCGCCACCGGAGTAGTACTTGGATCCTACATGGCTGTTATGACTGTTGTCTTCTTCTGGGCTGCTCATGCCTCAGATTTCTTCACAGAGAAGTTCGGTGTTAGATCAATTAGAGAAAACGATAAAGCATTAACATCAGCTGTTTATCTTCAAGTGAGCATTGTGAGTCAGGCACTCATCTTTGTTACTCGGTCAAGAAGCTGGTCATATGTTGAACGCCCTGGTTTGTTGCTTCTGGGAGCCTTTCTCATAGCACAATTGATTGCCACTGTCATAGCGGTGTATGCAAACTGGGGATTTGCAGATATAGAAGGAATCGGATGGGGCTGGGCCGGAGTAATATGGATTTACAACATTGTCTTCTACATTCCTTTGGATTTGCTAAAGTTCATAATCCGATATGCATTGAGTGGGAAAGCATGGAATAATATTACAGAGACCAGGACTGCTTTCACAACGAAGAAGGATTACGGGAGAGGAGAACGAGAAGCTCAATGGGCTACAGCTCAACGTACCCTCCATGGACTCAATCCTCCTCAAGCGGAGCAAATCCTCAACGAAATGAACTCCTATGGCGAATTGTCAGAACTCGCAGAACAAGCTAAGAAACGCGCTGAAGTTGCGAGGTTGAGGGAGCTTCACACGTTGAAGGGACATGTGGAATCGGTGGTGAAACTGAAGGGGCTTGACATAGATACGATTCAGCAACACTACACGGTTTGA 2421 0.4527 MAGGSLDEIKKENVDLGQPPDWQDFVGIVALLIINSTISFIEENNAGNAAAALMASLALKTKVLRDGKWTEQDASVLVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKNSSDEVFSGSTVKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIAIEELAGMDVLCSDKTGTLTLNKLTVDKTLIEVFVKDIDKDTLMLLGARASRVENQDAIDACIVGMLGDPKEARDGITEVHFLPFNPVDKRTAITYIDSAGNWHRVSKGAPEQIVELCNVKEDIKKKVHSIIDKFADRGLRSLAVARQEVPEKNKESPGAPWQFVGLLPLFDPPRHDSAETIKRALHLGVNVKMITGDQLAIGKETGRRLGMGSNMYPSSSLLGEHKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQDRKHICGMTGDGVNDAPALKKADIGIAVADATDAARNASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLLALIWKFDFSPFMVLIIAVLNDGTIMTISKDRVKPSPSPDSWKLNEIFATGVVLGSYMAVMTVVFFWAAHASDFFTEKFGVRSIRENDKALTSAVYLQVSIVSQALIFVTRSRSWSYVERPGLLLLGAFLIAQLIATVIAVYANWGFADIEGIGWGWAGVIWIYNIVFYIPLDLLKFIIRYALSGKAWNNITETRTAFTTKKDYGRGEREAQWATAQRTLHGLNPPQAEQILNEMNSYGELSELAEQAKKRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0885 806 Gene3D - 445 701 - -
Lele39g0885 806 Gene3D - 755 806 - -
Lele39g0885 806 Pfam E1-E2 ATPase 59 173 - -
Lele39g0885 806 SUPERFAMILY Calcium ATPase, transduction domain A 60 156 IPR008250 -
Lele39g0885 806 PRINTS P-type cation-transporting ATPase superfamily signature 466 478 - -
Lele39g0885 806 PRINTS P-type cation-transporting ATPase superfamily signature 443 462 - -
Lele39g0885 806 PRINTS P-type cation-transporting ATPase superfamily signature 106 120 - -
Lele39g0885 806 PRINTS P-type cation-transporting ATPase superfamily signature 338 349 - -
Lele39g0885 806 PRINTS P-type cation-transporting ATPase superfamily signature 360 370 - -
Lele39g0885 806 CDD P-type_ATPase_H 19 696 IPR006534 GO:0008553|GO:0016020|GO:0120029
Lele39g0885 806 Gene3D - 196 343 IPR023299 GO:0000166
Lele39g0885 806 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 173 661 IPR006534 GO:0008553|GO:0016020|GO:0120029
Lele39g0885 806 SFLD C1.7: P-type atpase like 171 494 - -
Lele39g0885 806 PRINTS H+-transporting ATPase (proton pump) signature 443 459 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele39g0885 806 PRINTS H+-transporting ATPase (proton pump) signature 615 636 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele39g0885 806 PRINTS H+-transporting ATPase (proton pump) signature 415 431 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele39g0885 806 PRINTS H+-transporting ATPase (proton pump) signature 300 318 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele39g0885 806 PRINTS H+-transporting ATPase (proton pump) signature 474 499 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele39g0885 806 FunFam Plasma membrane ATPase 59 143 - -
Lele39g0885 806 SFLD p-type atpase 171 494 IPR044492 -
Lele39g0885 806 FunFam ATPase 4 plasma membrane-type 428 670 - -
Lele39g0885 806 FunFam Plasma membrane ATPase 196 343 - -
Lele39g0885 806 FunFam Plasma membrane ATPase 336 491 - -
Lele39g0885 806 PANTHER CALCIUM-TRANSPORTING ATPASE 173 738 - -
Lele39g0885 806 ProSitePatterns E1-E2 ATPases phosphorylation site. 186 192 IPR018303 -
Lele39g0885 806 Pfam haloacid dehalogenase-like hydrolase 180 457 - -
Lele39g0885 806 SUPERFAMILY HAD-like 180 490 IPR036412 -
Lele39g0885 806 SUPERFAMILY Calcium ATPase, transmembrane domain M 16 702 IPR023298 -
Lele39g0885 806 Gene3D - 27 160 - -
Lele39g0885 806 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 418 529 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele39g0885 806 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 28 152 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele39g0885 806 Coils Coil 757 777 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0885 Lele-ChrLele39 17804744 17809003 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0885 17 777 Primary Pumps ATPases AT1G80660 70.299 0.0 1147