Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0880 ATGATAGATCTCAAATTGTCCAAAATTCCAGATCAAATTTTCCTTTCCTTAACAGCTATCACTATTACATCAGACAGCTGGCCAGAAAAACCATTAGAAACGATGAAGCAGCCTCAAGTGGTGATAAAAGAATATGATGAGGACAGACATAAGTTAGGAGTAGAAAAAATGGAGACAATTTGTGAGGTCGGCCATGGAGAAAATACGTCTCTTTTAACTGACCTCATGGGTGATCCCCTGTGTCGCATCCGCCACTTTCCTGTACATATCATGCTGGTTGCAGAATATGGAGAAGAAGTAGTTGGGGCGATCAGAGGATGCGTGAAAACAGTCACCAGAGGCTGTTCAGTTTATGTAAAGCTGGCTTATCTTTTGGGTCTCAGGGTCTCCCCCCCACACAGGAGACTCGGCATTGGCACAAAGCTAATTTCACATTTAGAAGAGTGGTGCAAACAACAACGAGCTGAATATGCGTACATGGCAACAGATTGCACGAACGAAGCATCAGTCAATTTATTCACCAAAAAATGCGGCTACTCAAAGTTCAGAACCCTAACCATGCTGGTTCAACCCGTCCATGCTCACCACAAGCCAATAAGCTCCAGCATTGCCGTAATTCGCCTTGCTCCATCCATAGCAGCATCAATCTACAACCATATCTTCGCCAATGCAGAATTCTACCCAAAGGACATAGACTCAATTCTATCGAACAATCTCAATCTGGGCACATTCATGGCCATACCGAATAAAACCTTACAAGAATGGGATTCGGAAACGGGGGTTCCGCCGCCGGATTACGCCATCACGAGCGTGTGGAACACGAAACAAGTTTTCAAACTGCAAGTGAAGGGGGTTTCGGCATGGAAGCGAGCTTTCTGCGCGGGAACGAGAGTGTTGGACACGTGGCTTCCATGCCTGAGGGTACCGTCATTCCCAGACGTTTTCAAGCCATTTGGGGTTTACGTGATGTACGGGCTACACATGGAAGGCGATGAAGGTAAAAAGCTGATGAGGTCGGTGTGCGACTTTGTGCATAATATGGGGAAAGATGACGACGGAGGGTGTGGGGCCGTCGTGGGGGAGCTCCCGGTGTGGGACCCAGCAACGGAGGCGGTCCCACACTGGAGAAGATTCTCGTGGGCCGAAGACATGTGGTGCATCAAGAGGCTTCAAGCTGAAGCTGAAGCTGAAGAAGAAGAAGAAGACGAGGCGAAGGAGAAGCAGGATAAGCGCGAGGATTGGATCGCGTCTGGATCATGCTCTTCATCTTCTTCTTCCGTAATTTTCGTTGATCCTCGTGAATTTTGA 1308 0.4786 MIDLKLSKIPDQIFLSLTAITITSDSWPEKPLETMKQPQVVIKEYDEDRHKLGVEKMETICEVGHGENTSLLTDLMGDPLCRIRHFPVHIMLVAEYGEEVVGAIRGCVKTVTRGCSVYVKLAYLLGLRVSPPHRRLGIGTKLISHLEEWCKQQRAEYAYMATDCTNEASVNLFTKKCGYSKFRTLTMLVQPVHAHHKPISSSIAVIRLAPSIAASIYNHIFANAEFYPKDIDSILSNNLNLGTFMAIPNKTLQEWDSETGVPPPDYAITSVWNTKQVFKLQVKGVSAWKRAFCAGTRVLDTWLPCLRVPSFPDVFKPFGVYVMYGLHMEGDEGKKLMRSVCDFVHNMGKDDDGGCGAVVGELPVWDPATEAVPHWRRFSWAEDMWCIKRLQAEAEAEEEEEDEAKEKQDKREDWIASGSCSSSSSSVIFVDPREF 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0880 435 Pfam Acetyltransferase (GNAT) family 90 179 IPR000182 GO:0016747
Lele39g0880 435 Gene3D - 68 187 - -
Lele39g0880 435 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 40 193 IPR000182 GO:0016747
Lele39g0880 435 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 36 435 - -
Lele39g0880 435 MobiDBLite consensus disorder prediction 394 435 - -
Lele39g0880 435 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 83 184 IPR016181 -
Lele39g0880 435 MobiDBLite consensus disorder prediction 415 429 - -
Lele39g0880 435 Coils Coil 387 417 - -
Lele39g0880 435 CDD NAT_SF 91 159 - -
Lele39g0880 435 FunFam Putative N-acetyltransferase HLS1 55 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0880 Lele-ChrLele39 17732198 17735761 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lele39g0880 Acetyltransf_1 1.6e-17 CL0257