Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0877 ATGGATTGTTCATCTTGGGTCAACACTTCCTTGGATCTCAATATCAGACCTTATCATCATATGCTTCATGAAGAAGTTCCAAAAAAGGAGGTGGAAAGCAATTTTTTCTCATCTGGGAAGAAATCTTCTGTAAAAGAAGAGACGTCAAGTGGTGCGTTGGAGGATGAACTGAAGAGGGTTAGTGCAGAGAACAAGAAGTTGACAGAAATGCTCACCGAGATGTGTGAGAATTACAATTCTCTGAGAAGACACCTAGCTGAATACATGAGAAACAATCCTCAAAAGGATCAAAACAACACCATCCCATCAAAGAGAAGGAAATCTGATAACATCAGCAGCAACAACAACACAAATAGTAATCCCATGGCCATTAATGGCACCTCAGAGAGCTGCTCAACTGATGAAGAATCATGCAAGAAACCTAAGGAAGGAACCAACAAAGCAAAAGTTTCCAAAGCTTATGTCAGGACCAAATCATCTGACACTAGCCTGATTGTGAAGGATGGATATCAATGGAGGAAATATGGGCAAAAAGTGACCAGAGATAACCCTTCTCCAAGAGCATACTTCAAATGCTCTTTTGCTCCAAGCTGTCCTGTAAAAAAGAAGGTGCAAAGAAGTGTGGAAGATCAATCTATTCTGGTAGCAACATATCTAGGGGAGCACAATCATCCTCATCCTTCTCAGATGGAGACAACAACAACGACAGGATCTAACCGTTTTGTGAGCCAAGCTTCAGTACCATGTTCATCAGCATCTCTGAACTCTTCCTCTGCACCAGCAACAATTACCTTTGACTTGACAAAATCCAAGTCCAGCAGCCCCAACAACATGAATGCTGCCTCCGCCCCCACCACCAAGAACCCCACACCGAAACTCGATTCGCCGGAAGTCCCTCAGGTTTTGGTGGAACATATGGCCTCTTCCTTGACTAAAGATCCCAATTTCAGAGCAGCACTTGTTGCCGCCATTTCAGGAAGAATATCCCATATGAATTAA 999 0.4304 MDCSSWVNTSLDLNIRPYHHMLHEEVPKKEVESNFFSSGKKSSVKEETSSGALEDELKRVSAENKKLTEMLTEMCENYNSLRRHLAEYMRNNPQKDQNNTIPSKRRKSDNISSNNNTNSNPMAINGTSESCSTDEESCKKPKEGTNKAKVSKAYVRTKSSDTSLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSILVATYLGEHNHPHPSQMETTTTTGSNRFVSQASVPCSSASLNSSSAPATITFDLTKSKSSSPNNMNAASAPTTKNPTPKLDSPEVPQVLVEHMASSLTKDPNFRAALVAAISGRISHMN 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0877 332 Gene3D WRKY domain 148 228 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele39g0877 332 ProSiteProfiles WRKY domain profile. 161 227 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele39g0877 332 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 28 328 IPR044810 GO:0003700
Lele39g0877 332 SMART WRKY_cls 166 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele39g0877 332 Coils Coil 50 77 - -
Lele39g0877 332 FunFam WRKY transcription factor 40 151 228 - -
Lele39g0877 332 Pfam WRKY DNA -binding domain 167 225 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele39g0877 332 MobiDBLite consensus disorder prediction 267 293 - -
Lele39g0877 332 MobiDBLite consensus disorder prediction 91 132 - -
Lele39g0877 332 MobiDBLite consensus disorder prediction 267 296 - -
Lele39g0877 332 MobiDBLite consensus disorder prediction 133 149 - -
Lele39g0877 332 MobiDBLite consensus disorder prediction 31 55 - -
Lele39g0877 332 SUPERFAMILY WRKY DNA-binding domain 162 227 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele39g0877 332 MobiDBLite consensus disorder prediction 91 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0877 Lele-ChrLele39 17713202 17714704 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0877 4 332 WRKY Transcription Factor Family AT1G80840 48.968 1.35e-95 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele39g0877 WRKY 1.2e-22 CL0274