Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0876 ATGTCCGGCCAAAGCCAGCGTCTTAATGTGGTTCCCACAGTCACAATGCTTGGAGTCATGAAGGCTCGCCTCGTCGGAGCCACGCGAGGCCATGCTCTTCTCAAGAAGAAGAGTGATGCTCTGACTGTACAGTTCCGTGCGATCCTCAAGAAGATCGTGTCCACCAAGGAATCAATGGGGGATATCATGAAAACTTCTTCTTTTGCACTGACAGAAGTCAAGTACGTTGCTGGTGACAACATCAAACATGTTGTGCTCGAGAATGTTCGAGAAGCTTCCCTGAAGGTTCGTTCTCGGCAAGAGAACGTAGCTGGTGTTAAGCTCCCCAAGTTTGAGTATTCAAATGATGGTGAAGTCTCTAAGAATGATCTTACTGGATTGGCAAGAGGTGGCCAACAAGTTCAACAGTGTCGTGCTGCTTATATTAAGGCAATTGAAGTTCTTGTTGAGCTTGCTTCACTTCAGACATCTTTTTTGACACTCGATGAGGCTATCAAGACGACGAATCGGAGAGTGAATGCCCTTGAAAATGTGGTTAAGCCCAGGTTGGAGAATACAATCAGTTATATCAAGGGAGAGTTGGATGAGCTAGAAAGAGAGGATTTCTTTAGGTTGAAGAAGATTCAAGGGTATAAAAAGAGAGAAATAGAGAGGCAGATGAAGATGGCCAAGCAATTTGCTGAGGAACAGGTTGCTGAGAAAATTGCTTTGCAGAAAGGAATTTCACTGAATTCAGCCCATAACTTGTTGTCTGCTGGAAATGAGAAAGATGAGGATATCATTTTCTAA 789 0.4411 MSGQSQRLNVVPTVTMLGVMKARLVGATRGHALLKKKSDALTVQFRAILKKIVSTKESMGDIMKTSSFALTEVKYVAGDNIKHVVLENVREASLKVRSRQENVAGVKLPKFEYSNDGEVSKNDLTGLARGGQQVQQCRAAYIKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLENTISYIKGELDELEREDFFRLKKIQGYKKREIERQMKMAKQFAEEQVAEKIALQKGISLNSAHNLLSAGNEKDEDIIF 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0876 262 Coils Coil 180 200 - -
Lele39g0876 262 Gene3D - 1 199 - -
Lele39g0876 262 FunFam V-type proton ATPase subunit D 1 199 - -
Lele39g0876 262 PANTHER V-TYPE ATP SYNTHASE SUBUNIT D 1 262 IPR002699 GO:0046961
Lele39g0876 262 TIGRFAM V_ATPase_subD: V-type ATPase, D subunit 9 213 IPR002699 GO:0046961
Lele39g0876 262 Pfam ATP synthase subunit D 17 209 IPR002699 GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0876 Lele-ChrLele39 17697313 17698101 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0876 1 262 Primary Pumps ATPases(2) AT3G58730 83.206 8.05e-163 450