Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0874 ATGGCGGAGGAACAGAGACAGTCGAGGAGCGTTATCTTCAACAAGTATGAGATTGGGAGGCTTCTCGGCCAAGGGAATTTCGCTAAGGTTTATTATGGAAGAAACCTCATGACCAACGAGAGTGTTGCGATTAAGGTGATTAAGAAGGAGAAGCTTGAGAAAGGGAAGCTGAAGCTGATGAAGCAGATCAAGAGAGAAGTCTCGATAATGCGATTGGTTCGACACCCACACATAGTGGAGCTGAAAGAAGTCATGGCTACAAAGGGAAAGATCTTTCTAGTTATGGATTATGTTAAAGGCGGTGAACTGTTCGCTAAAGTCGCGAAAGGAAAATTGAACGAAGATTTAGCGAGAAAATATTTCCAGCAATTGATTTCCGCCGTCGATTTCTGTCACAGCCGCGGCGTCACTCACCGGGATCTCAAGCCTGAGAATCTGTTCCTCAACGAAAACGAGGATCTGAAGGTCTCCGACTTTGGTCTGTCGGCCTTGCCGGAGCAGCGCCGGTCCGACGGGATGCTCGTGACGCCGTGTGGGACGCCGTCTTACGTGGCGCCGGAGGTTTTGAAGAAGAAAGGTTACGATGGGTCGAAAGCAGATATCTGGTCTTGTGGAGTAATTCTCTATGCTCTGCTTTCTGGGTATCTTCCTTTTCAAGGTGAGAATGTGATGAGAATTTACAAGAAATCATTCAAAGCTCAATACGTATTACCAGATTGGATTTCACCGGAAGCAAAGAATTTAATCTCTAAATTACTAGTGGTCGACCCAGAAAAGAGATATTCGATCGATGACATAATGAAGGATCCATGGTTTCAATATGGGTTCATGAGACCAATCGCATTTTCCATAAAGGAACCAAGATTAGAAGATTTCGCAGATGATGATAACATCGGGGAAGTGGAAGAAAAAATGGTGGGAGGACAGGGAAGTAGTGATGAAGATAATCATCAAGAAGAAGCACAATCCCAATCACGGCCATTTTACAATGCGTTTGAGATAATTTCGTCGTTGTCACATGGGTTTGATCTGAGGAGCTTGTTTGAGACGAGGAAGAGGTCGCCGTCGATGTTCACGACGAAGTTCTCGGCAGCGGCGGTGGTGGGGAAGATGGAGGGGGTGGCGAGGAAGTTGAATCTGAGGATAACGGGGAAGAAGGAGTACATGGTGAGGATGCAGGGGTCGAAGGAGGGAAGGAAGGGGAAGTTGGGGATGACGGTGGAGGTGTTCGAGGTGGCGCCGGAGGTGGCGGTGGTGGAGTTCTCAAAGTCCTCCGGCGACACCTTGGAGTATTTAAAGCTGTGTGAGGAACAAGTAAGACCAGCACTGAAAGATATCGTCTGGAGTTGGCAAGGGGATACCAATCCTCATCCACAAGGCTAA 1383 0.4758 MAEEQRQSRSVIFNKYEIGRLLGQGNFAKVYYGRNLMTNESVAIKVIKKEKLEKGKLKLMKQIKREVSIMRLVRHPHIVELKEVMATKGKIFLVMDYVKGGELFAKVAKGKLNEDLARKYFQQLISAVDFCHSRGVTHRDLKPENLFLNENEDLKVSDFGLSALPEQRRSDGMLVTPCGTPSYVAPEVLKKKGYDGSKADIWSCGVILYALLSGYLPFQGENVMRIYKKSFKAQYVLPDWISPEAKNLISKLLVVDPEKRYSIDDIMKDPWFQYGFMRPIAFSIKEPRLEDFADDDNIGEVEEKMVGGQGSSDEDNHQEEAQSQSRPFYNAFEIISSLSHGFDLRSLFETRKRSPSMFTTKFSAAAVVGKMEGVARKLNLRITGKKEYMVRMQGSKEGRKGKLGMTVEVFEVAPEVAVVEFSKSSGDTLEYLKLCEEQVRPALKDIVWSWQGDTNPHPQG 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0874 460 ProSiteProfiles NAF domain profile. 324 349 IPR018451 GO:0007165
Lele39g0874 460 FunFam Non-specific serine/threonine protein kinase 324 448 - -
Lele39g0874 460 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 444 - -
Lele39g0874 460 SUPERFAMILY Protein kinase-like (PK-like) 12 273 IPR011009 -
Lele39g0874 460 FunFam Non-specific serine/threonine protein kinase 98 279 - -
Lele39g0874 460 MobiDBLite consensus disorder prediction 305 325 - -
Lele39g0874 460 Gene3D Phosphorylase Kinase; domain 1 1 97 - -
Lele39g0874 460 FunFam Aurora kinase A 8 101 - -
Lele39g0874 460 CDD CIPK_C 330 444 - -
Lele39g0874 460 Gene3D Transferase(Phosphotransferase) domain 1 98 276 - -
Lele39g0874 460 SMART serkin_6 16 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0874 460 Gene3D Kinase associated domain 1, KA1 324 449 - -
Lele39g0874 460 Pfam NAF domain 328 383 IPR004041 GO:0007165
Lele39g0874 460 Pfam Protein kinase domain 16 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0874 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Lele39g0874 460 MobiDBLite consensus disorder prediction 305 321 - -
Lele39g0874 460 ProSitePatterns Protein kinases ATP-binding region signature. 22 49 IPR017441 GO:0005524
Lele39g0874 460 ProSiteProfiles Protein kinase domain profile. 16 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0874 Lele-ChrLele39 17668698 17670080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0874 1 455 CBL-interacting serine-threonine protein kinases AT5G25110 60.000 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele39g0874 Pkinase 1.6e-75 CL0016