Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0860 ATGGACAACAAGATGGGGATGATGATGATGAGCTTCAACAGATTCAAGACAGGCTGTGCTCTATCTGCCATAGCTTTCTCTGTACTGCTCATAGTTACATTGATCTATCAGAACTCGGTGTTTAATCTTTCTGTTGAGGGTTTTTCAAAAGACAAGGTACTAGGAAGAAGAAGACCTCTCAACGTTACAACCATCGATTTAGGATTTAGAGAAAGAGCTAATAAAACATCAGATATCAATGGAACCTCCTCAGAGTCAAGATTTTCCCAGGAAACACTCAACATTACAGCAACAGAAGATAGTGCTCAGAATCTTACAGAGTCACATGAAGAATTGAAAAAAGCTTCAACCTCACCTGTCAAAAATGACACTGATCAGCAATTATATGAAGGGCTTCTAGCTTCTGGGTTTGATGAATCATCATGCATAAGCAGGTTTCAATCTTACTTGTACCGATACAGAAAATCTTCTCCTCACAAACCCTCTTCATATCTGATCTCCAAACTCCGCAATTATGAAGAAATTCACAGAACCTGTGGACCTGGGACAAGACATTACAATAAAGCCATGAAAAAGCTCGTAAAGTTTAAGAAACACAGTACTAACACCACTTGTAAGTACCTTGTTTGGACTCCTGCAAATGGCTTAGGGAACAGAATCATAAGCATGGCTGCTGCATTTGTTTATGCTGTTCTCACAGATAGAGTCCTACTTGTGAAATTTGAAGATGACATGATGGGTTTGTTCTGTGAACCATTTCTAAATTCAACATGGGAATTTCCGAAAGATTCTCCTTTTTGGAATCTTCCAAGAGATGTTGAAACATATCAAAACATGATAGCTAAGAACAGTTCTTCATCGCGGCCGCCATCGGTTCTTCATCTGAATCTGCAGCATACGAAAGATGATCCTGAGAAGTTTTTCCATTGTGATCAAAGTCAAAAGCTTGTTCAAAAAGTTCCCATCTTGATTTTACAAACAGATCAGTATTTTGTCCCTTTTCTGTTCATGATCCCATCTTTCAACCCTGAGATCACACAAATGTTCCCAGAAAAAGACACTGTTTTTCACCATGTGGGACATTACCTTTTTCACCCTTCAAATGAAGCATGGGGACTAATAAAAAGATTCTATGATGCTTACTTAGCAAAATCAGATGTGAAAATTGGCCTTCAAGTCAGATTATTCTCTCCTGATACAACCCCACATGAAGCAGCGATGGATCTACTCTTGAGATGTACCTTGCAGCACAAGTTACTCCCAGAACTAGACATGAAAAACCCCGTAGCTTCTTCACCCCGGGAAAACTCGAGCTTAAAGGCGGTTCTAGTGGCATCTCTATTTCAAGAATATAGTGAGAATTTGAGGATTATGTATCTGACAAAACCAACCATTACAGGGGAATTGGTTGGAGTATATCAAGCAAGTCATGAAGGGAAACAAAAGTTTCATAACAATATGCATAATATGAAGGCATGGACTGAAATGTACCTTTTGAGTTTGAGTGATGTGTTGGTGACTACTTCTTTGTCTACTTTTGGTTATGTGGCTCAAGGTTTGGGAGGATTAAAGCCATGGCTTCTTTATAGGTTAGTTGGAAATAAGTCTCTTCATCCTAATCCACCTTGTCAAAGGGACTTCTCTATGGAGCCTTGTCATCACATTCCTCCTAAACATGATTGTGAGGGAAACACTATCAAAGATTTTAGTTCTTCTTTCCCTTACATGAGGTCATGTTTGGATTATTCTTCTGGAGTGAAGTTGTTTAATGTTTCTGTGCAGTAG 1785 0.3899 MDNKMGMMMMSFNRFKTGCALSAIAFSVLLIVTLIYQNSVFNLSVEGFSKDKVLGRRRPLNVTTIDLGFRERANKTSDINGTSSESRFSQETLNITATEDSAQNLTESHEELKKASTSPVKNDTDQQLYEGLLASGFDESSCISRFQSYLYRYRKSSPHKPSSYLISKLRNYEEIHRTCGPGTRHYNKAMKKLVKFKKHSTNTTCKYLVWTPANGLGNRIISMAAAFVYAVLTDRVLLVKFEDDMMGLFCEPFLNSTWEFPKDSPFWNLPRDVETYQNMIAKNSSSSRPPSVLHLNLQHTKDDPEKFFHCDQSQKLVQKVPILILQTDQYFVPFLFMIPSFNPEITQMFPEKDTVFHHVGHYLFHPSNEAWGLIKRFYDAYLAKSDVKIGLQVRLFSPDTTPHEAAMDLLLRCTLQHKLLPELDMKNPVASSPRENSSLKAVLVASLFQEYSENLRIMYLTKPTITGELVGVYQASHEGKQKFHNNMHNMKAWTEMYLLSLSDVLVTTSLSTFGYVAQGLGGLKPWLLYRLVGNKSLHPNPPCQRDFSMEPCHHIPPKHDCEGNTIKDFSSSFPYMRSCLDYSSGVKLFNVSVQ 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0860 594 Gene3D - 202 308 - -
Lele39g0860 594 FunFam Galactoside 2-alpha-L-fucosyltransferase 203 254 - -
Lele39g0860 594 PANTHER FUCOSYLTRANSFERASE 2-RELATED 23 590 IPR004938 GO:0008107|GO:0016020|GO:0042546
Lele39g0860 594 MobiDBLite consensus disorder prediction 102 121 - -
Lele39g0860 594 MobiDBLite consensus disorder prediction 104 118 - -
Lele39g0860 594 Pfam Xyloglucan fucosyltransferase 113 561 IPR004938 GO:0008107|GO:0016020|GO:0042546
Lele39g0860 594 Coils Coil 95 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0860 Lele-ChrLele39 17530610 17533574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0860 120 588 Xyloglucan Fucosyltransferase1 AT2G03220 50.837 6.09e-161 470
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0728 41 17222849 17224928 Lele39g0860 39 17530610 17533574 CCT
Lele42g0725 42 20300915 20304960 Lele39g0860 39 17530610 17533574 CCT
Lele37g0570 37 4713039 4716371 Lele39g0860 39 17530610 17533574 hybridization
Lele38g0538 38 4499518 4503249 Lele39g0860 39 17530610 17533574 hybridization