Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0859 ATGACTTCAAGATCATTCCCTCCAAATCCAGATCACAATTTTTTCACCACATACAGGGTCCTTATTCTGGCTCTCATTGTCTCAGCGTCTCTGTTAATTTTCTGCTCAATACTTTACTTCCTATACTATCTATGGTACTCTGTGGTACACAGAGCTAAAACGATACCTTTTGATGCAAATTCTCCATTGAAGCTCCAAAGATTTTCTTACAAAGAACTCAAGAAAGGCACCAATGGTTTTCACACAGAAAATGTCATTGGCAAAGGGGGATCTAGCACAGTTTTTAAAGGGAAGCTTAAAGATGAGAACTTTATTGCCATTAAGCGTTTAGATGCTTTGTGTTTACAAACAGAGCAAGAGTTTCAGAATGAGCTTCAGATTCTTGGTGGGTTAAAAGTGTCCCCTTTCATTGTCACTCTTCTGGGATATTGTATGGAGAAGAACAAGAGAGCTTTGGCGTTTGAATATATGCCTAAGGGAAGTTTGCAGGAGTTTCTCTTTGGAGATGATGACTGTTTGAGTTTAAGCTGGGAAAAGAGGTTTCTTGTAATATTGGATGTTGCTAAAGCTTTGGAATTCCTTCACATTGAATGTGACCCTCCAGTGATACATGGGGATATCAAGCCAAGCAATGTTCTTCTTGATGAAGAGTACCACGCGAAGATTTCGGATTTCGGGTTGTCAAGGATTAAAGTGGAGGAGGGCGAGTTTAGTGGGAATATGTTTAGCCAGGACTTGGGTGATAAGAGCCAGGAGCTATGGAAAAGCCAAGAGTTTTCAGGTAATTTAACTGCTGATAGTTCTGTTGAGCATGTTAATGAAGTAGATTTTGCTCAAGCTTTGCAGGCATCTTCTTCCTCCTCCAAGTATAGTTGTAGTAGGGTAGGTTTTAATGTTGGAGCTTTGAACTTGAATTCTTTGAATTATAATGCCTGCAAAAGTGAAAATGGAGTAAGGACAAAAACTAGTGTCAAGGGGAAGGAAATAATCTCAGGTTTGGATATTGGTGATGAGGATTTTTCCAGAAATATTGATCATAGTAAAGAGTTAAATGTTAATGCTTTCTCGGCAGATGAAGAAAAGCCAAATGAAAAACAATGGGGAAATTCAGATTGGTGGTGGAAACAGGATGATGAAAGTGCAGAATTATGCACTAAAGATTATGTCATGGAGTGGATAGGGAGTCAAATTCATCCATCAAACAATGATTGGGATGAAGAAAAGAAGAACATTCCTGAGAAAACAGAACTGGAAAATTCTAGTCCAACAGATAACCCAGATGATTCTAACAAAGAATCAGTGGAAAAGAAATATCATGAGAAGCAGCATAAGAAGATGAAAGAGTTGTGGAAAGAAGAGAATCTTGCAGAATCAAGCAAGAACAGTGGCAACCTGATGAAAAATCTTCAAACCAAGTGGAAGTTTTATCTCTGGAGATGTAAAAATTTCCAAAGGGAGGATCAGAATCAAAATGGGGAGTTAATTAGTTTCAGAAGAGGTTCGAAGAAGAAGAAGAAAGAAAATATTAGTCCTTCCAATGGCAGCGAGATGCGAAGCGGAGAACTTTTCAGCAGCACAACACCCAGCATGAGAGGAACACTGAGTTATGTTGCTCCAGAATATGGTAGTGGTTGGCAGTTGGCAAAATCTGGTAACATTTTAGAACTTGTAGATGAGAGGTTGGGAGAAGAAGATTATAATAAGGAACAAGCAAGCTTGTGCATCAACATGGCACTTTCTTGCTTACAGAGAAATCCAGGATTAAGGCCACATATTGGGGATATTGTTAAGATTCTGAAAGGGGATATTTGA 1812 0.388 MTSRSFPPNPDHNFFTTYRVLILALIVSASLLIFCSILYFLYYLWYSVVHRAKTIPFDANSPLKLQRFSYKELKKGTNGFHTENVIGKGGSSTVFKGKLKDENFIAIKRLDALCLQTEQEFQNELQILGGLKVSPFIVTLLGYCMEKNKRALAFEYMPKGSLQEFLFGDDDCLSLSWEKRFLVILDVAKALEFLHIECDPPVIHGDIKPSNVLLDEEYHAKISDFGLSRIKVEEGEFSGNMFSQDLGDKSQELWKSQEFSGNLTADSSVEHVNEVDFAQALQASSSSSKYSCSRVGFNVGALNLNSLNYNACKSENGVRTKTSVKGKEIISGLDIGDEDFSRNIDHSKELNVNAFSADEEKPNEKQWGNSDWWWKQDDESAELCTKDYVMEWIGSQIHPSNNDWDEEKKNIPEKTELENSSPTDNPDDSNKESVEKKYHEKQHKKMKELWKEENLAESSKNSGNLMKNLQTKWKFYLWRCKNFQREDQNQNGELISFRRGSKKKKKENISPSNGSEMRSGELFSSTTPSMRGTLSYVAPEYGSGWQLAKSGNILELVDERLGEEDYNKEQASLCINMALSCLQRNPGLRPHIGDIVKILKGDI 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0859 603 SMART serkin_6 80 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0859 603 Gene3D Transferase(Phosphotransferase) domain 1 521 602 - -
Lele39g0859 603 SUPERFAMILY Protein kinase-like (PK-like) 59 597 IPR011009 -
Lele39g0859 603 Pfam Protein kinase domain 80 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0859 603 MobiDBLite consensus disorder prediction 428 446 - -
Lele39g0859 603 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Lele39g0859 603 ProSitePatterns Protein kinases ATP-binding region signature. 86 108 IPR017441 GO:0005524
Lele39g0859 603 MobiDBLite consensus disorder prediction 412 446 - -
Lele39g0859 603 Gene3D Transferase(Phosphotransferase) domain 1 157 263 - -
Lele39g0859 603 FunFam Os07g0541700 protein 157 247 - -
Lele39g0859 603 Gene3D Phosphorylase Kinase; domain 1 55 156 - -
Lele39g0859 603 ProSiteProfiles Protein kinase domain profile. 80 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0859 603 MobiDBLite consensus disorder prediction 491 526 - -
Lele39g0859 603 PANTHER OS07G0586332 PROTEIN 546 602 IPR044576 -
Lele39g0859 603 MobiDBLite consensus disorder prediction 512 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0859 Lele-ChrLele39 17525924 17527870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0859 19 269 Receptor kinase-like Gene Family AT3G58690 34.815 9.94e-42 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Lele39g0859 Pkinase 3.6e-29 CL0016