Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0855 ATGGGAATATACCTTAGCGCCCCGAAAACAGAGAAGGCTTCTGATGATGGTGAGAATGACAAGCTTCGCTACGGTTTGTCTTCCATGCAGGGCTGGCGTGCTAACATGGAAGATGCTCATGCGGCCCATCTAAATTTGGACGAGTCAACATCTTTCTTTGGTGTTTATGACGGCCATGGAGGTAAAGCTGTTGCTAAATTTTGTGCCAAATATCTGCACCGGCAGGTGCTTAAGAATGAAGCTTATGTTGCTGGAGACATAGGCACATCTTTGCAGAAAACTTTTCTCAGAATGGATGAGATGATGCGTGGACAAAGAGGGTGGAGAGAATTAGCAGTCTTGGGAGATAATATAGAAAAGTTGTCCGGTATGCTGGAGGGCTTTATTTGGTCTCCTAGGGGTGGTGAAGGCAATGACCATTCTGATGATTGGGTTCTTGAGGAGGGACCACATTCTGATTTTACTGGACCAAACTCTGGATGCACAGCTTGTGTTGCAGTCATCCAAGGCAACCAACTTGTAGTCGCAAATGCCGGTGATTCTCGGTGTGTAATATCAAGGAAGGGCCAGGCACATAATTTATCTAAAGACCACAAGCCTGACCTTGAAGTTGAGAGAGATAGGATTCTAAAAGCTGGTGGTTTCATACAAGTCGGGCGAGTTAATGGAAGTCTAAACTTGGCCAGAGCAATTGGAGACATGGAATTCAAGCAAAACAAGTTTTTGCCTGCTGAAAAGCAGATTGTGACCGCTGATCCGGATATAAATTCTGTTGAGCTTTGCGATGATGACGAGTTTCTTGTAATAGCGTGTGATGGAATATGGGATTGCATGTCAAGCCAACAGCTTGTGGATTTTATACATTCACAGTTGAAGACGGAGAATAAACTCTCTGCAGTTTGCGAGAAAGTATTTGATCGGTGCTTATCACCTACGGCTGGCGGCGAGGGATGTGACAACATGACCATGATCTTGGTTCAGTTCAAAAAGCCTCCGAGTCCTGATGATTCGATTACAGACAAGCCATCCAAGGTCGATGATGAGAGTTCAAATCAACCATCCAACGGCGAAAGAAGTTCAGACCAACCAATCTAG 1095 0.4502 MGIYLSAPKTEKASDDGENDKLRYGLSSMQGWRANMEDAHAAHLNLDESTSFFGVYDGHGGKAVAKFCAKYLHRQVLKNEAYVAGDIGTSLQKTFLRMDEMMRGQRGWRELAVLGDNIEKLSGMLEGFIWSPRGGEGNDHSDDWVLEEGPHSDFTGPNSGCTACVAVIQGNQLVVANAGDSRCVISRKGQAHNLSKDHKPDLEVERDRILKAGGFIQVGRVNGSLNLARAIGDMEFKQNKFLPAEKQIVTADPDINSVELCDDDEFLVIACDGIWDCMSSQQLVDFIHSQLKTENKLSAVCEKVFDRCLSPTAGGEGCDNMTMILVQFKKPPSPDDSITDKPSKVDDESSNQPSNGERSSDQPI 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0855 364 ProSiteProfiles PPM-type phosphatase domain profile. 23 328 IPR001932 -
Lele39g0855 364 PANTHER PROTEIN PHOSPHATASE 2C 19 327 IPR015655 GO:0004722|GO:0006470
Lele39g0855 364 CDD PP2Cc 23 328 IPR001932 -
Lele39g0855 364 Pfam Protein phosphatase 2C 155 313 IPR001932 -
Lele39g0855 364 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Lele39g0855 364 Gene3D - 1 329 IPR036457 -
Lele39g0855 364 MobiDBLite consensus disorder prediction 329 364 - -
Lele39g0855 364 MobiDBLite consensus disorder prediction 348 364 - -
Lele39g0855 364 SUPERFAMILY PP2C-like 3 331 IPR036457 -
Lele39g0855 364 SMART PP2C_4 13 326 IPR001932 -
Lele39g0855 364 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0855 Lele-ChrLele39 17503371 17509710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0855 1 337 PP2C-type Phosphatase Gene Family AT2G25070 78.070 0.0 570