Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0845 ATGAAAGTCACGTGCCTGTTCGTTGAGCTTGCCAGCAATCACATTCAGTATGAAATGAGTTCACCACGCTCTTTTTCTCGTTCTATCTCTTCCGAACTTGAAGAAGAGATGAAGAAGAAGCATGCCGATGTGGAGCTGGAGAAGAAGAAGTATCCGACTGGTGCCGAGCATTATGAACTCTACGAAGAAATTGGGCAAGGCGTGAGTGCTACAGTTCACCGAGTTCTCTGTAAACCGTTCAATGAGACTGTTGCCATCAAAATTCTTGATTTTGAACGCGACAATGCTAATCTGAATAACATTTTTCGTGAAGCACAAACAATGAACCTAATTGACCACCCTAATGTCCTTAGATCACACTGCTCATTCGTTAGTGATCATAATCTGTGGTTTGTCATGCCATATATGGCTGGCGGTTCCTGTCTTCACATCTTAAAAGCCGCTTACCCTGATGGTTTTGAGGAGGTTGTAATAGCCACAATATTGCGAGAGGTATTAAAGGGTTTAGAATATCTTCATCAGCATGGACACATACATCGAGATGTCAAAGCTGGGAACATTCTAATTGATCGCAATGGGTCAATCAAGCTTGGAGATTTTGGTGTATCTGCTTGCCTTTTTGATTCTGGTGATAGGCAACGCGCACGGAATACATTTGTGGGGACACCCTGCTGGATGGCACCTGAGGTCATGGAGCAACTGCATGGCTATGACTTCAAGGCTGATATCTGGTCATTTGGCATAACTGCATTGGAGCTTGCCCATGGTCATGCTCCTTTCTCAAAGTATCCACCAATGAAGGTACTGTTGATGACATTGCAACATGCACCTCCTGGCCTCGATTATGAAAGGGATAAAAAGTTCTCTCATATGATTGCTAGCTGTTTAGTGAAAGATCCTTCAAAACGACCAACTGCCAAAAAGTTGTTAAAGCATTCATTCTTTAGGCAAGCTCGCACAAATGATTATATTTCAAGAAAGCTTTTGGAAGGGCTTCCTGCTTTAGGTGATCGCATTAAAGCCCTAAAGATAAAAGAAGAAGACATGCTTGCTCAAGAGAAAATGCCTGATGGGCGAATGGAAGAAATATCTCAGAATGAATACAAGCGAGGAATTAGTGGCTGGAACTTCAATCTTCATGATATGAAGGCTCAGGCTTCCTTGATCCAGGATTCTGACGACCTCATAGATGATAATGCAGGATGTTCAAATTCCTTTTCTACAATTAATGAGCATAACAAGCCATCATCAAGTCGAAACCAAAATCCCTCTCAAATTGCAGATATGGACAACACTGATGAGATGCAAAATAAATCAGCTTCTGTCCCCATAGTTGGCTCCCCATTAAATGGCACCAAGTTAAAATGTGAGGATCATGATTCTAGCATCACCAGTCCAAGCTATAGTCAGGACATTTCGCAAGGCTCTTCATCGGGTCTTGATAATCAGGTTGATCATAAAATGGATGAAAAATCTAGTAGGGAGAATTGCGGGAGGTCTGTAGAGAGCACATCTATTCATTCCCTTCGTGGTAGATTTTCAATGAGCGTCTCCCACGAAGTTACACCTCCATCTTTTCAGGGAGAAAGGGAGAAGCTGCAACATCAGCCGCAGAACAACTTAAACTGCAATGCAACTACAGTTACCATAACGAGGAATGATGGGCATTCTGAACTTTCTTTTAAAGCTTCAAAATTGTCAGTTGCTAGTTCTAATGACAATGATGAGAAAGCAAAGGTACCAGTTGTTGAGCAGAGAGGACGGTTTAAGGTTATATCTGAAAATGTTGACTTAGAAAAGGTGACTGATAACTCTGACGAGGCTCACCCTTCTTTCTTCAATACTAAATAA 1851 0.4192 MKVTCLFVELASNHIQYEMSSPRSFSRSISSELEEEMKKKHADVELEKKKYPTGAEHYELYEEIGQGVSATVHRVLCKPFNETVAIKILDFERDNANLNNIFREAQTMNLIDHPNVLRSHCSFVSDHNLWFVMPYMAGGSCLHILKAAYPDGFEEVVIATILREVLKGLEYLHQHGHIHRDVKAGNILIDRNGSIKLGDFGVSACLFDSGDRQRARNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQHAPPGLDYERDKKFSHMIASCLVKDPSKRPTAKKLLKHSFFRQARTNDYISRKLLEGLPALGDRIKALKIKEEDMLAQEKMPDGRMEEISQNEYKRGISGWNFNLHDMKAQASLIQDSDDLIDDNAGCSNSFSTINEHNKPSSSRNQNPSQIADMDNTDEMQNKSASVPIVGSPLNGTKLKCEDHDSSITSPSYSQDISQGSSSGLDNQVDHKMDEKSSRENCGRSVESTSIHSLRGRFSMSVSHEVTPPSFQGEREKLQHQPQNNLNCNATTVTITRNDGHSELSFKASKLSVASSNDNDEKAKVPVVEQRGRFKVISENVDLEKVTDNSDEAHPSFFNTK 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0845 616 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 47 601 - -
Lele39g0845 616 FunFam Serine/threonine-protein kinase BLUS1 47 135 - -
Lele39g0845 616 CDD STKc_OSR1_SPAK 56 315 - -
Lele39g0845 616 MobiDBLite consensus disorder prediction 406 446 - -
Lele39g0845 616 Gene3D Transferase(Phosphotransferase) domain 1 139 365 - -
Lele39g0845 616 SUPERFAMILY Protein kinase-like (PK-like) 56 316 IPR011009 -
Lele39g0845 616 FunFam serine/threonine-protein kinase BLUS1 isoform X1 139 368 - -
Lele39g0845 616 MobiDBLite consensus disorder prediction 483 497 - -
Lele39g0845 616 ProSiteProfiles Protein kinase domain profile. 58 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0845 616 MobiDBLite consensus disorder prediction 461 482 - -
Lele39g0845 616 SMART serkin_6 58 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0845 616 Gene3D Phosphorylase Kinase; domain 1 47 134 - -
Lele39g0845 616 MobiDBLite consensus disorder prediction 406 506 - -
Lele39g0845 616 Coils Coil 30 50 - -
Lele39g0845 616 ProSitePatterns Protein kinases ATP-binding region signature. 64 87 IPR017441 GO:0005524
Lele39g0845 616 Pfam Protein kinase domain 58 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0845 Lele-ChrLele39 17441560 17447171 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0845 46 602 MAP Kinase Kinase Kinase Kinase AT1G79640 63.894 0.0 712
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Lele39g0845 Pkinase 2.5e-59 CL0016