Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0837 ATGGAGTCGTCGTCGTCGTCATCAATGTCCGCTGTATTACTGATCATCTTCTTCGTTTCAATTTCGACATCTCTGTGTTTTCATGGCGGCGAGGCAACGGTGGTTACTGTGTCTAAGGATGGGGATGGAGATTATGGAAGTGTGAGTGAAGCCATAGCCAAAGCTCCGAAGTTCAGTAAAAAACCCTATACCATTCAAGTTCGACGTGGAACTTATAAAGAGTATGTCGTGGTTCCGCCGGAGAAAACCAATATTAAGCTCGTCGGTGATGGCCCTCGCCTGACCAGAATAGTTGGCTCCCACTATGGCACCACCCTAGATGTTTATGGAGATGGGTTCGTGGCGGAGAACATCGGTCTGGTGAACTCAGCTGGGTTAAAAGCAAGCGCTGCTGTGGCGGTTCGCAATGAAGCCAACAAGAGCATCTTCTTCCAATGTTCTATTGAAGGCTTTCAAGATACACTCTGGGCGGTCGCCGGCCGCCAGTTCTACAAGAATTGTGACATCTATGGCACTGTTGACTTCATCTACGGTAATGCTGTTTCTCTCTTCCAGGATTGCAACCTCTACGCTCGTTACCGGCCTTACGTCACCTTCACCGCCCAGTCACGTGCTAGCCCTAACGAGAAGACCGCCTTCGCCTTCCAACACTGCCACTTCACGATGGCCCCAGAAGATGCCGGCATGAAGTCGAAGGTTCGTGCGACGTTGGGAAGGCCATGGCGGCCGTATTCGACGGTGGCCGTGATTGACTCGTTCATTGACTCCATGGTTGACCCCAGGGGATGGGAAGAAATGAGAGGTCAGCCTACCGATAAGGTGACGTATGTGGAGTTTAATAATTATGGGCCTGGGTCCAACACTTCTGGGAGAGTCAAGTGGCATGGGGTTAGAGTCCTGAAAGGCCCAAATGAGGCCCAACGTTTTACAGCTTCTGTTCTGTTAGATGGTGATTCTTGGATCCCCCACAAGGGGGTTCCTTATAATTGA 990 0.5071 MESSSSSSMSAVLLIIFFVSISTSLCFHGGEATVVTVSKDGDGDYGSVSEAIAKAPKFSKKPYTIQVRRGTYKEYVVVPPEKTNIKLVGDGPRLTRIVGSHYGTTLDVYGDGFVAENIGLVNSAGLKASAAVAVRNEANKSIFFQCSIEGFQDTLWAVAGRQFYKNCDIYGTVDFIYGNAVSLFQDCNLYARYRPYVTFTAQSRASPNEKTAFAFQHCHFTMAPEDAGMKSKVRATLGRPWRPYSTVAVIDSFIDSMVDPRGWEEMRGQPTDKVTYVEFNNYGPGSNTSGRVKWHGVRVLKGPNEAQRFTASVLLDGDSWIPHKGVPYN 329
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0837 329 Gene3D - 31 329 IPR012334 -
Lele39g0837 329 FunFam Pectinesterase 4 31 329 - -
Lele39g0837 329 PANTHER PECTINESTERASE 35 322 - -
Lele39g0837 329 SUPERFAMILY Pectin lyase-like 32 328 IPR011050 -
Lele39g0837 329 Pfam Pectinesterase 35 318 IPR000070 GO:0030599|GO:0042545
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele39g0837 Lele-ChrLele39 17383296 17386576 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0837 25 328 Carbohydrate Esterase AT5G49180 38.558 1.60e-77 246