Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0835 ATGGGTTCTACAGAGGATAAAATAGACCTTGACTCAGATGAGGAGATTGCTTTTAGACCATCACCATCTGCCACAAAAGTCCATACATTTGATTTTGAGACAGAACATGTACTTTCTCCTGTAAATTTGGCCAGCTCGTCCTTCTTTAAGCGGACACAGATCCGACCTTTCAGGAGCATATATATTGTCTTAATTAAAGCGAAGATCAACATGTTGCTACCTTTTGGTCCCTTGGCAATATTGCTACATTATCTAACACAAAAGCATGGATGGGTGTTCTTTTTCAGCTTGTTGGGGATTACTCCTTTGGCAGAACGTTTGGGATATGCTACGGAGCAGCTTGCATTGTATACTGGACCAACAGTTGGAGGTCTGCTGAATGCCACATTTGGCAATGCCACTGAAATGATTATATCAATTTATGCTTTGAAAAATGGGATGATTAGAGTTGTTCAGCAGTCTCTGTTGGGCTCAATTTTATCAAATATGCTTCTGGTTCTTGGATGTGCCTTCTTTACTGGAGGGATTGTCCACCACAATAAGGTTCAGCTTTTCGACAAGGCATCTGCTGTTGTAAATTCAGGGTTGCTCCTGATGGCTGTGATGGGAATACTGTTTCCTGCTGTCCTTCACTTTACTCACTCTGAGGTTCACTTTGGAAAATCGGAGTTATCACTATCCAGATTTAGTAGCTGTATAATGCTCGTGGCATATGCAAGCTACCTTTTCTTTCAATTAAGAAGTCAGCATAATCTTTATAGCCCTATTGAATCGGAGGATGGTAATAGGGAAAATGATGATGAAGAAGAAGTTGAATTAACTCAATGGGAAGCAATAGGCTGGCTTTCTATTTTGACAATATGGGTATCTGTATTGTCTGGATACCTAGTGGATGCCATACAGGGGGCATCTGAGTCATTGCATATGCCTGTGGCTTTTATTAGTGTCATATTGCTTCCAATAGTAGGCAATGCTGCTGAACATGCAAGTGCCATCATGTTTGCCATGAAGGATAAGCTTGATATCACACTTGGAGTTGCTATTGGATCTTCTACACAGATATCTATGTTTGTGATCCCTTTCTGTGTTGTTATTGGGTGGTGCATGGGAAAAGAAATGGACTTGAATTTTCAACTCTTTGAGACCGCCACACTTTTTATCACAGTTCTAGTAGTTGCATTTATGTTGCAGGAAGGGACATCAAATTATTTTAAAGGCTTGATGCTTATTCTTTGCTACCTCATTGTTGCAGCCAGTTTTTTTGTACATGTAGACCCTACAGAAGGTGATAACTGA 1296 0.4035 MGSTEDKIDLDSDEEIAFRPSPSATKVHTFDFETEHVLSPVNLASSSFFKRTQIRPFRSIYIVLIKAKINMLLPFGPLAILLHYLTQKHGWVFFFSLLGITPLAERLGYATEQLALYTGPTVGGLLNATFGNATEMIISIYALKNGMIRVVQQSLLGSILSNMLLVLGCAFFTGGIVHHNKVQLFDKASAVVNSGLLLMAVMGILFPAVLHFTHSEVHFGKSELSLSRFSSCIMLVAYASYLFFQLRSQHNLYSPIESEDGNRENDDEEEVELTQWEAIGWLSILTIWVSVLSGYLVDAIQGASESLHMPVAFISVILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGSSTQISMFVIPFCVVIGWCMGKEMDLNFQLFETATLFITVLVVAFMLQEGTSNYFKGLMLILCYLIVAASFFVHVDPTEGDN 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0835 431 Gene3D - 120 259 IPR044880 -
Lele39g0835 431 Gene3D - 267 422 IPR044880 -
Lele39g0835 431 Pfam Sodium/calcium exchanger protein 281 418 IPR004837 GO:0016020|GO:0055085
Lele39g0835 431 Pfam Sodium/calcium exchanger protein 91 246 IPR004837 GO:0016020|GO:0055085
Lele39g0835 431 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 34 426 IPR004713 GO:0006812|GO:0008324|GO:0016020
Lele39g0835 431 FunFam Vacuolar cation/proton exchanger 120 259 - -
Lele39g0835 431 FunFam Vacuolar cation/proton exchanger 266 422 - -
Lele39g0835 431 TIGRFAM cax: calcium/proton exchanger 72 421 IPR004798 GO:0006816|GO:0015369
Lele39g0835 431 TIGRFAM caca2: calcium/proton exchanger 63 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0835 Lele-ChrLele39 17360759 17367260 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0835 45 430 Antiporters AT1G55730 75.000 0.0 592