Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0828 ATGAGGCATCTCTGTGTGCTTCTTCTTCTTCCTCTGTTCTTTCCTTCCTTGTTATGCTCTGTTTCTGCTTTAAGCTCTGATGGGGTTACTCTATTGTCACTCTTGAGGCACTGGACTTCTGTACCTCATCCTATAAAATCCACCTGGAATCTCTCAGATTCCACTCCTTGTTCTTGGGTTGGAATCCAGTGCGACCATGCCCACAATGTGATATCCCTTAACCTCACTGATTATGGGATTGAGGGTAAAATAGGGCCTGAGATTGGACTTTTGAGTCACTTGCAGAACCTTGTGTTGATGAATAATGGCTTCTCTGGAAAAATTCCTTCCGAGTTAGGGAATTGTAGTCTTTTAGAATACTTAGAACTTTATGTTAATAACTTTAGTGGACAAATACCTATGAGCTTCAAAAACTTGCAGAATTTGAATCATTTCAGCCTTCCTTATAATAAACTCACTGGTCAAATCCCAGAATTCATCCCCCAAATCCCTAACCTGCAATTTGTTGACTTGTCTTATAATTCTCTCGATGGTTCAATTCCTTCAGAAATAGGAAACATGAGTGAGCTTACGTTCCTGTATCTACACAATAATCATATGTTGTCTGGTGAAATTCCTTCATCAATTGGGAATTGTAGTAAATTGCAGGACTTGTCCTTGAATGAGAATCAGTTTCATGGAACACTCCCAGAAACTCTTAACAATCTCCATGATATTGCTTATTTGAACTTTGCTTCTAATAATCTTAGTGGTACTGTTCCATTGGGTTCTGGAAATTGTAAGAATTTGTCTTTCTTGGATCTGTCAAACAATTCATTCAGTGGAGGTATTCCTTCAAGCTTGGGAAATTGTAGTGGCTTAACCACATTTTCTGCATTTAGCAGTGGCTTTACCGGCAGTATTCCGTCCTCCATCGGTTTGCTTCGCGAGCTTTCCCTTTTATGGCTTCCTGTGAATCGTTTGTCCGGGAAAATACCTCCGGAGATCGGCAACTGTAAGTCTTTGACACAGTTGCATTTGTATTCCAATCAACTCGAGGGAGAAATTCCCAGTGAGCTGGGAGAGCTGAGTGAATTGCAGGATCTGGAATTGTTTTCCAACCGTTTGACCGGCGAAATTCCTCTCGGTGTTTGGAAGATTCGAAGTCTCAAGCAAATCCTCGTGTACAGTAATAGCCTCTCTGGCGAGCTACCTTTGGAGATGACAGAGCTCAAGCATCTGAAGAATATCTCGTTGTTTGACAACAACTTCTCCGGAGTCATACCTCAAACTTTGGGAATCAAAACCCGATTAGTATTGTTGGACTTGACGAATAACAAGTTCACCGGTAACATCCCGCCAAATCTTTGTTCTGGAAAGAAATTAACTTTGCTGACTTTGGGCTTTAATCAGCTAGAAGGTAGCATACCTCCAGATGTAGGAAGGTGTACAACTCTCAAAAGGTTGATTCTTCAAGAAAACAATTTTACGGGGCCCTTGCCTGATTTTGAACATAATCCGAATCTCATGTTCTTGGATATCAGTGGAAACAATATCAATGGCTCAATCCCACCAAGTTTGGGAAACTGCTCAAATGTCACTGATTTAATTCTGTCAAATAACAACTTTGCGGGTCATATACCGGCAGAGCTAGGTCTCCTTGGAAACCTGAAGACTCTGCATCTTAATCACAACCGCTTGGAAGGTCCTTTGCCACGTGAGCTGTCAAAATGTACTAAAATGGACAGTTTTGATGTGGGATTCAATTTCCTGAATGGTTCATTTCCAACGAGTTTTAGGATCTGGACGGCGCTGACCACGTTAATTATAAGAGAGAATCGTTTTCGTGGTGGCATCCCGGATTTCTTGTCAGAATTTAAAAACCTCCTTGAGCTGCAGCTTGGTGGAAACATGTTTGGAGGAAATATTCCAGGATCAATCGGGGCATTGCAGAATCTGCGCTACGGGTTGAATCTAAGTGATAATGGGCTGGTTGGTGAAATTCCTCAAGAGATGGGAAAATTGACGAATCTGCTAAATTTGGATCTATCTCGGAACAATTTGACTGGAAGCATACGAGTTCTCGCCGAGCTTTCTTCATTACTTAAAGTCAATGTTTCATACAATTCCTTCAATGGCCCTGTACCGGAGACGCTGATGAAGCTACTTAATTCTGATCCTTCATCGTTTTCGGGAAATCCCGGCTTGTGTGTCAGTTGTTCATCATCAAACAGACCGGATTGCGATCAGGGAAGCCATCTAAAGCCATGTGATGATAGATTGACAAACAAGAAAGGGCTTAGTAAAGTACAGGTAGCAATGATAGCACTTGGATCATCAATATTCTTTGTTCTTTTGCTGCTGGGAATGATGTACATGTGTGTACATGGCGGAAAATCAAAGCAGGAAGTCGAGATCACTGCCAAAGAAGGCACTTCCTTGCTTTTAAACAAAGTGATGGAGGCTACTGCTAACCTAAGTGACCGGTTTATCATCGGTAGAGGGGCTCATGGAGTAGTTTATAAAGCTTCAGTAGACGCAGGCCAAGTTTTTGCTGTGAAGAAGCTTGTATTTTCCGGGAACAAAGGCAAGAGCATGGTTAGAGAAATTCAAACCCTCGGAAAGATTAGGCACCGAAATCTGGTCAAATTAGAAGACTTTTGGTTGAGAAAAGACTTTGGTTTGATCTTGTACACCTACATGCCAAATGGAAGCCTCCATGAAGTCTTGCACGAAAAGCATCCACCGCCATCTTTGGAGTGGAGTGTTCGATACAAGATAGCCATTGGCGTGGCTCATGGATTGGCCTATCTCCATTATGATTGTGATCCTCCCATAGTACACCGTGACATCAAACCACAAAACATACTCCTAGATTCTGATATGGAGCCTCACATTGCCGATTTCGGTATCGCCAAGCTTTTGGATCAATCTTCTGTTTCAGCACCATCTATATCTGTACCTGGCACAGTAGGATACATTGCACCAGAGAACGCATATACGACAGCGAACAATAGAGAATCCGATGTATACAGTTATGGGGTAGTTTTGCTTGAGTTGATAACCAGAAAGAAAGCAGTGGATCAATCATTCATGGTGGGAGTTGATATAGTGAGCTGGGTCAGAACTCTGTGGGGTGAAACAGAATGTATTCATGAGATTGCTGATTCAAGTCTTGCAGGGCAGTTTCTGGATTCAAATGTTCTTGAACAAGCTCCCAGAGTGCTCTTGGTGGCTCTGAAATGCACCGAGAAGGATCCACGTGTGAGACCCACAATGAGAGATGTCATCAAGCAATTAGACGATGCTAATCCAAGAACAAGGAGTAAAAAGCTTCCAAGTTCCCACCCCTTAATCCGTAGCTAA 3345 0.4233 MRHLCVLLLLPLFFPSLLCSVSALSSDGVTLLSLLRHWTSVPHPIKSTWNLSDSTPCSWVGIQCDHAHNVISLNLTDYGIEGKIGPEIGLLSHLQNLVLMNNGFSGKIPSELGNCSLLEYLELYVNNFSGQIPMSFKNLQNLNHFSLPYNKLTGQIPEFIPQIPNLQFVDLSYNSLDGSIPSEIGNMSELTFLYLHNNHMLSGEIPSSIGNCSKLQDLSLNENQFHGTLPETLNNLHDIAYLNFASNNLSGTVPLGSGNCKNLSFLDLSNNSFSGGIPSSLGNCSGLTTFSAFSSGFTGSIPSSIGLLRELSLLWLPVNRLSGKIPPEIGNCKSLTQLHLYSNQLEGEIPSELGELSELQDLELFSNRLTGEIPLGVWKIRSLKQILVYSNSLSGELPLEMTELKHLKNISLFDNNFSGVIPQTLGIKTRLVLLDLTNNKFTGNIPPNLCSGKKLTLLTLGFNQLEGSIPPDVGRCTTLKRLILQENNFTGPLPDFEHNPNLMFLDISGNNINGSIPPSLGNCSNVTDLILSNNNFAGHIPAELGLLGNLKTLHLNHNRLEGPLPRELSKCTKMDSFDVGFNFLNGSFPTSFRIWTALTTLIIRENRFRGGIPDFLSEFKNLLELQLGGNMFGGNIPGSIGALQNLRYGLNLSDNGLVGEIPQEMGKLTNLLNLDLSRNNLTGSIRVLAELSSLLKVNVSYNSFNGPVPETLMKLLNSDPSSFSGNPGLCVSCSSSNRPDCDQGSHLKPCDDRLTNKKGLSKVQVAMIALGSSIFFVLLLLGMMYMCVHGGKSKQEVEITAKEGTSLLLNKVMEATANLSDRFIIGRGAHGVVYKASVDAGQVFAVKKLVFSGNKGKSMVREIQTLGKIRHRNLVKLEDFWLRKDFGLILYTYMPNGSLHEVLHEKHPPPSLEWSVRYKIAIGVAHGLAYLHYDCDPPIVHRDIKPQNILLDSDMEPHIADFGIAKLLDQSSVSAPSISVPGTVGYIAPENAYTTANNRESDVYSYGVVLLELITRKKAVDQSFMVGVDIVSWVRTLWGETECIHEIADSSLAGQFLDSNVLEQAPRVLLVALKCTEKDPRVRPTMRDVIKQLDDANPRTRSKKLPSSHPLIRS 1114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0828 1114 FunFam Serine/threonine-protein kinase-like protein CCR4 894 1109 - -
Lele39g0828 1114 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Lele39g0828 1114 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 23 181 - -
Lele39g0828 1114 Gene3D Phosphorylase Kinase; domain 1 783 893 - -
Lele39g0828 1114 SUPERFAMILY L domain-like 405 737 - -
Lele39g0828 1114 Gene3D Ribonuclease Inhibitor 188 312 IPR032675 -
Lele39g0828 1114 Gene3D Ribonuclease Inhibitor 313 476 IPR032675 -
Lele39g0828 1114 ProSitePatterns Serine/Threonine protein kinases active-site signature. 939 951 IPR008271 GO:0004672|GO:0006468
Lele39g0828 1114 ProSitePatterns Protein kinases ATP-binding region signature. 825 848 IPR017441 GO:0005524
Lele39g0828 1114 SMART LRR_typ_2 500 523 IPR003591 -
Lele39g0828 1114 SMART LRR_typ_2 453 476 IPR003591 -
Lele39g0828 1114 SMART LRR_typ_2 429 452 IPR003591 -
Lele39g0828 1114 SMART LRR_typ_2 163 186 IPR003591 -
Lele39g0828 1114 SMART LRR_typ_2 332 356 IPR003591 -
Lele39g0828 1114 SMART LRR_typ_2 91 115 IPR003591 -
Lele39g0828 1114 SMART LRR_typ_2 547 571 IPR003591 -
Lele39g0828 1114 SMART LRR_typ_2 187 212 IPR003591 -
Lele39g0828 1114 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 182 277 - -
Lele39g0828 1114 MobiDBLite consensus disorder prediction 1094 1114 - -
Lele39g0828 1114 SMART serkin_6 819 1100 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0828 1114 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 453 738 - -
Lele39g0828 1114 Gene3D Ribonuclease Inhibitor 25 183 IPR032675 -
Lele39g0828 1114 Pfam Protein kinase domain 824 1091 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0828 1114 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 479 1093 - -
Lele39g0828 1114 SUPERFAMILY L domain-like 61 452 - -
Lele39g0828 1114 ProSiteProfiles Protein kinase domain profile. 819 1112 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0828 1114 SUPERFAMILY Protein kinase-like (PK-like) 806 1093 IPR011009 -
Lele39g0828 1114 FunFam Predicted protein 300 399 - -
Lele39g0828 1114 Gene3D Transferase(Phosphotransferase) domain 1 894 1108 - -
Lele39g0828 1114 Gene3D Ribonuclease Inhibitor 477 748 IPR032675 -
Lele39g0828 1114 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 785 893 - -
Lele39g0828 1114 ProSiteProfiles Leucine-rich repeat profile. 670 692 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0828 Lele-ChrLele39 17296270 17300509 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0828 18 1102 Receptor kinase-like Gene Family AT1G73080 53.224 0.0 1076
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele39g0828 Pkinase 1.4e-43 CL0016