Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0822 ATGATACTCCAATTATTATTATTATTGACCATATGCTTGTCTGCTCCTTTATACACCGCTTCTGCCTTGAGTTCAGATGGGTTAACTCTTTTGTCTCTTTTCAGTCATTGGACTTCTGTGCCTCCTTCCTTAAATTCAAGCTGGAATTCATCTGATTCCGCCCCTTGCTTATGGACAGGAATACAATGTGACCAGTATGGCAAGGTGATCTCCCTAAACCTCACTACTTACAGTATTTTTGGTCAACTCGGACCAGAAATTGGACAGTTGACTCATTTGCAGAACCTTGTGTTGGTTGCAAATGGTTTCTCAGGAACAATACCTCTAGAGTTGGGAAATTGTAGTCTGCTTGAGTATATTGACCTTTCTGATAACTACTTCAGTGGAAGCATACCATATTCATTGAAAAAGTTGCGAAAACTGAAGTATGTACGTGTTTCTTCTAATCTGATCTATGGTGAAGTTCCTGAGTTATTGTTTCAAATTCCCGAACTAGAAGTGATTGATCTTCACAATAACAATCTAAGTAGTCCCATCCCATCCAATATCGGGAACAGAACTGAATTGTTGAAGCTGCATCTATCTAACAATCAGTTGTCAGGAACAATTCCCTCTTCCATAGATGTCAAAACCAATAGCCTTAGTGGTACCATCCCTCTTGGCTCTGGAAGTTGTGGCAAGCTGTTTATTTTGGATCTGTCATTCAATATTGCAATTCTTCGCCTTCCTGAGAACCATTTGTCTGGAAATATACCTCCAGAAATTGGCAACTGCAAATCCTTGAAGAAGTTACATCTATACTCCAATCAACTGGGAGGAACAATTCCGAATGAATTGGGAGGATTGAGTAAATTGGAGGACCTTGAACTATACTCCAACCATTTAACGGGTGAAATTCCACTTTCCATTTGGACGATTCAAAATCTTAAGCATGTCCTTCTTCACGATAATAGCCTTTCAGGGAAATTGCCTTCAGAGATGACAGAGCTCAACCATCTGAAAAATATCTCATTGTTTGACAATCAATTGTCTGGATCAATTCCTCAAAACTTGGGAATCAATAGCAGTTTAGTGAAGTTAGACTTGATGAATAACAAGTTTATCGGTGAGATCCCTCCAAAACTTTGCTTTGGAAAGCAACTGCACTCACTGAGTTTAGGTCTTAATCAACTTCAAGGGGGCATACCTCAAGATTTGGGAAGATGTGCAACTCTTGGGAGGAATAACATTACAGGGATTATACCCGTAGAGCTAGGAAATCTTGTGAACCTTCAAGCTCTGAGTCTTGCTTGCAACAACCTCGAAGGTCCATTGCCACTGCAGCTGTCATACTGTACCAAAATGTTGGCATTTGATGTGGGATTCAATTTTCTTAATGGTTCATTCCCATCAAGCATGAGGAGCTGGACAGGGTTAACCACATTAGTTTTAAGGGAGAATCGTTTTAGCGGGGATATACCATCTTTCTTATCTGAATATGACCAGCTTCTTGAGCTACAACTTGGAGGAAATATGTTTGTGGGGAAAATTCCTACATCAATTGGATCATTGCAGAATCTCTTATATGAGTTGAATCTGAGTGCTAATAAATTAACAGAATGGAGAATGCGACAACTGAATTTATCTCCATCATCTTTCTTCGGAAATCCTGGCCTGTGTGTCCGTTGTTTGACTTCAGATGGCTTGAGTTGCCGAAAAACTAGCCTTTTAAAGCCATGTGACTCTGAATCAACTGACCACAAAGGCAGTAGACGTTCAATTTTATTTATAGCACTGGGATTCGTGGGGTTTGTCATCTGTCTGTCAGGAATACTACTAATTTATGACCGCTACTATGGCCAAACATCTAAGGATGGCCATACATCTAAGGAGGATGAGGAAGTTGTTACTTATTATCAAGAACAAAATTACATCCGTGAGTTTGGTCTAAGATCTGTGCTGGTGGTGAATTCTGATTATGAAGAGCGAGAGGTTCTGTATTCAAATGATGAAGTAGATTTTAGAATTATTGATATACTACATGCTACAGAGAATCTGCATGATCAATATATAATTGGCCAAGGAGGGCATGGAATTGTCTATAAAGCCGAACTTGATTTTGGAGTTTTTGCTGTTAAGAAGGTTAAATTTGGACGGAGCAATAGGAGGAAAGCAAACATGATCAAGGAAATCGAAATGACTAGGAAGATTAGGCATCAAAATGTGGCCAGATGCCTAGGCTTCTGGATTGGTGAGGAATATGGTCTAACCATCAGCAAGTACAAGGAAAAGGGTAGTCTTCATGACGTTTTGCATGAACACAATCCACAACCATCCTTAGCATGGAATGTCCGCTATAAGATTGCTATTGGAGTTGCAAGAGGATTGGCATATCTCCATCATGATTGTGATCCTCCCATATTGCATCGAGACATAAAACCAAAGAATATACTACTTGATTCTGATATGCAACCTTGTATTACTGATTTTGGTATTTCCATTGCCTTGAATCAGTCCTCTGCTAGTGGGCGTATGCGGACAACATATCATCTAGAGATTGCATATGCAATAGTGCCGAGCAGTGAGCTTGACATATATGGTTATGGGGTAGTTTTGCTTGAGCTGATAACGGGAAAGAAAGTATTAGATTCCTCATTTATGGAGGAGAAAACCTCTTTAGTAGGTTGGTTTAAATCTGTATGGAGGAGAACAAGAGAACTTGAAGAGATTGTTGATTCAAGCATTGCAAGGGAGCTTTCAGATTTGAACGTAATGGCGCAAGCAATCAAAGTGCTTTTGGTGGCTTTAATATGTACTCAAAAAGACCCTAGAAAGAGACTGAAAATGTTAGTGTTGTTGAATTCTTTGAAACACCCACAGATCCAGATTGCTACTAGTTATCATATCAGGAATCATGAATCACGATGGTTCAGAGTTGTTGGAAGGAGAATGAGACTTGTGTGTTGTCTGACCTGTACAGGTATTTTTGTTCGGCGTGACGGAGCTCAATTTCATTTGGGGGTTTTCCTCAGTACTGCTGGGGCCTCTAATCTCTTTCAGGCCTTGCAAGATTCAAATGAATATGGTGAGCCTGAAAGGCGTGAGATCTTTGAGGAAGGAGAGATCCGTGCCAATGAAGGTTCTTCCTCAGTTCCTTACAAAGTGATGTTGGAGGCTGCTGCAAATCCAAATAATCTGAACATGATTTTCAGAAGAACTCGTGGAGTTGTTTCTAAAGTAAAACTACATTCAGGCCGAGTTTGTGCTGAAAGGAAGGTTACATTTGCGGGGAACAAAGGCAATATCTCAAGCGTGGTTAGAGAAATTGAAATCCTTGAAAAGATCAGGCACCGAAATATAGTCAGAATGCTAGAGCATATGCACAGAGAACACTATGGTATAATCTGGTACGAGTACGTGCCAAATGGAAATCTTCATGATGTTTTGCATGAAAAGAATCCACCGCCATCCCTGAAATGGGATGTCCGTTATAAGATAGCCACTGGAATTGCTCATGGATTGGCCTATCTTCATTATGATTTTCATCCTGCCATTGTGCATGGTGCCATCAAACCAAGAAATATACTTCTAGATTCTGATATGGAGCCTCTAATTGCTGATTTCGGTTTTGCCCAGTTTTTCGATTGGTCTTCCACCGCACCATCTCCATCAGTTCCAGGCACACTAGGATATATTACACAAGGTACATCGTTTACTCGTACTGTCAATCTTTATGTTCACTTTCTTTTCCATTTTCAAATGCTTCTGACCAAAAATGCATATACAACAGCAAATACCAGGGAATCTGACGTCTACAGTTATGGGGTAGTTTTGCTTCAGTTGATAACTAGAAAGAAGGTAGTAGATCCATCATTTATGAATGGAACAGAGATAGCAATTTGGGTCAGAACTCGATGGAGGGAAACAGGAGACATTAATACAATTGTTGATTCAAGCCTTGCAGAGGAAGTTGTGAATCCATTTTTATATGAACAAGTTATTGATGTGCTTTTGGTGGCTCTGAGATGCACCGAGGAGGATCCATACATGAGACCCACAATGAGGGACATTCTCAGGCGACTATAA 4065 0.4012 MILQLLLLLTICLSAPLYTASALSSDGLTLLSLFSHWTSVPPSLNSSWNSSDSAPCLWTGIQCDQYGKVISLNLTTYSIFGQLGPEIGQLTHLQNLVLVANGFSGTIPLELGNCSLLEYIDLSDNYFSGSIPYSLKKLRKLKYVRVSSNLIYGEVPELLFQIPELEVIDLHNNNLSSPIPSNIGNRTELLKLHLSNNQLSGTIPSSIDVKTNSLSGTIPLGSGSCGKLFILDLSFNIAILRLPENHLSGNIPPEIGNCKSLKKLHLYSNQLGGTIPNELGGLSKLEDLELYSNHLTGEIPLSIWTIQNLKHVLLHDNSLSGKLPSEMTELNHLKNISLFDNQLSGSIPQNLGINSSLVKLDLMNNKFIGEIPPKLCFGKQLHSLSLGLNQLQGGIPQDLGRCATLGRNNITGIIPVELGNLVNLQALSLACNNLEGPLPLQLSYCTKMLAFDVGFNFLNGSFPSSMRSWTGLTTLVLRENRFSGDIPSFLSEYDQLLELQLGGNMFVGKIPTSIGSLQNLLYELNLSANKLTEWRMRQLNLSPSSFFGNPGLCVRCLTSDGLSCRKTSLLKPCDSESTDHKGSRRSILFIALGFVGFVICLSGILLIYDRYYGQTSKDGHTSKEDEEVVTYYQEQNYIREFGLRSVLVVNSDYEEREVLYSNDEVDFRIIDILHATENLHDQYIIGQGGHGIVYKAELDFGVFAVKKVKFGRSNRRKANMIKEIEMTRKIRHQNVARCLGFWIGEEYGLTISKYKEKGSLHDVLHEHNPQPSLAWNVRYKIAIGVARGLAYLHHDCDPPILHRDIKPKNILLDSDMQPCITDFGISIALNQSSASGRMRTTYHLEIAYAIVPSSELDIYGYGVVLLELITGKKVLDSSFMEEKTSLVGWFKSVWRRTRELEEIVDSSIARELSDLNVMAQAIKVLLVALICTQKDPRKRLKMLVLLNSLKHPQIQIATSYHIRNHESRWFRVVGRRMRLVCCLTCTGIFVRRDGAQFHLGVFLSTAGASNLFQALQDSNEYGEPERREIFEEGEIRANEGSSSVPYKVMLEAAANPNNLNMIFRRTRGVVSKVKLHSGRVCAERKVTFAGNKGNISSVVREIEILEKIRHRNIVRMLEHMHREHYGIIWYEYVPNGNLHDVLHEKNPPPSLKWDVRYKIATGIAHGLAYLHYDFHPAIVHGAIKPRNILLDSDMEPLIADFGFAQFFDWSSTAPSPSVPGTLGYITQGTSFTRTVNLYVHFLFHFQMLLTKNAYTTANTRESDVYSYGVVLLQLITRKKVVDPSFMNGTEIAIWVRTRWRETGDINTIVDSSLAEEVVNPFLYEQVIDVLLVALRCTEEDPYMRPTMRDILRRL 1354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0822 1354 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
Lele39g0822 1354 ProSitePatterns Protein kinases ATP-binding region signature. 685 707 IPR017441 GO:0005524
Lele39g0822 1354 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 1133 1354 - -
Lele39g0822 1354 SUPERFAMILY Protein kinase-like (PK-like) 665 949 IPR011009 -
Lele39g0822 1354 Gene3D Phosphorylase Kinase; domain 1 644 754 - -
Lele39g0822 1354 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 207 942 - -
Lele39g0822 1354 Gene3D Transferase(Phosphotransferase) domain 1 756 968 - -
Lele39g0822 1354 Gene3D Transferase(Phosphotransferase) domain 1 1134 1354 - -
Lele39g0822 1354 Gene3D Ribonuclease Inhibitor 405 561 IPR032675 -
Lele39g0822 1354 Gene3D Ribonuclease Inhibitor 238 404 IPR032675 -
Lele39g0822 1354 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 207 407 - -
Lele39g0822 1354 Pfam Protein kinase domain 1068 1352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0822 1354 Pfam Protein kinase domain 681 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0822 1354 ProSitePatterns Serine/Threonine protein kinases active-site signature. 800 812 IPR008271 GO:0004672|GO:0006468
Lele39g0822 1354 SUPERFAMILY L domain-like 355 536 - -
Lele39g0822 1354 FunFam Nuclear pore complex protein NUP107 23 181 - -
Lele39g0822 1354 SMART serkin_6 1063 1352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0822 1354 SMART serkin_6 679 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0822 1354 SUPERFAMILY Protein kinase-like (PK-like) 1045 1354 IPR011009 -
Lele39g0822 1354 Gene3D Phosphorylase Kinase; domain 1 1040 1133 - -
Lele39g0822 1354 SUPERFAMILY RNI-like 71 404 - -
Lele39g0822 1354 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 756 961 - -
Lele39g0822 1354 ProSiteProfiles Protein kinase domain profile. 679 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0822 1354 ProSiteProfiles Protein kinase domain profile. 1056 1354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0822 1354 Gene3D Ribonuclease Inhibitor 23 237 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0822 Lele-ChrLele39 17233927 17239598 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0822 14 951 Receptor kinase-like Gene Family AT1G73080 38.684 0.0 664
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele39g0822 Pkinase 1.9e-27 CL0016