Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0811 ATGCTTGCAATATTAAAAATGGGTGAGGAGGTTAAGACAATTGTTCCAGAGTCTGTGTTGAAGAAGAGGAAGAGAGAAGAGGAATGGGCATTGGCCAAGGCACAGGAGACTGAAGCTGCAAAAAAGAAGAGAGCTGAGAGCCGAAAGCTGATCTACAACAGAGCTAAGCAGTATGCCAAGGAGTATGAGGAGCAGGATAAGGAGTTGATTAGATTGAAACGTGAGGCAAAGCTGAAAGGGGGATTTTATGTAGATCCAGAGGCTAAACTATTGTTTATTGTTCGCATCCGTGGTATTAATGCCATGCACCCAAAGACCAGGAAGATCTTGCAACTCTTGCGTTTGAGGCAGATATTCAATGGCGTGTTTCTTAAAGTCAACAAGGCCACAATGAACATGCTTCACAGGGTTGAACCTTATGTGACCTATGGGTATCCAAACTTGAAGAGTGTAAGAGAACTTATTTACAAGAGGGGCTATGGTAAGATCAACAAGCAGAGAATTGCTTTAACTGACAATTCCATCATTGAGCAGGCACTGGGCAAGTATGGAATCATATCCACTGAAGATCTTATCCATGAGATCATAACAGTTGGACCTCACTTTAAGGAGGCCAACAACTTCCTTTGGCCCTTTAAACTCAAGGCACCTTTGGGTGGACTAAAGAAGAAGAGGAACCACTATGTTGAAGGTGGTGATGCTGGAAACCGGGAGAATTACATCAATGAGCTCATTAGGAGAATGAACTAG 750 0.4307 MLAILKMGEEVKTIVPESVLKKRKREEEWALAKAQETEAAKKKRAESRKLIYNRAKQYAKEYEEQDKELIRLKREAKLKGGFYVDPEAKLLFIVRIRGINAMHPKTRKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKINKQRIALTDNSIIEQALGKYGIISTEDLIHEIITVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0811 249 Coils Coil 55 79 - -
Lele39g0811 249 FunFam 60S ribosomal protein L7 90 194 - -
Lele39g0811 249 FunFam 60S ribosomal protein L7 195 249 - -
Lele39g0811 249 SUPERFAMILY Ribosomal protein L30p/L7e 90 249 IPR036919 -
Lele39g0811 249 Pfam Ribosomal L30 N-terminal domain 15 86 IPR012988 -
Lele39g0811 249 CDD Ribosomal_L7_archeal_euk 90 249 IPR035808 -
Lele39g0811 249 ProSitePatterns Ribosomal protein L30 signature. 109 141 IPR018038 -
Lele39g0811 249 TIGRFAM uL30_euk: 60S ribosomal protein uL30 16 249 IPR005998 GO:0000463|GO:0003735|GO:0022625
Lele39g0811 249 Gene3D - 191 249 IPR036919 -
Lele39g0811 249 Gene3D - 90 190 IPR036919 -
Lele39g0811 249 Pfam Ribosomal protein L30p/L7e 91 141 IPR016082 -
Lele39g0811 249 PANTHER 60S RIBOSOMAL PROTEIN L7 13 249 IPR039699 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0811 Lele-ChrLele39 17158053 17161503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0811 10 249 Cytoplasmic Ribosomal Protein Gene Family AT3G13580 85.000 4.06e-155 429