Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0788 ATGGGCGCGCACGCCGCTTTGCCTGTGCGCGTTCCGGCAGTAACTTCTGATCTTCTTGTCCTTCTTCTACTTCTTCTTCTTCTTCTGTCGTGGTCGTCTCCTTCGTTGTCCTACACGGATGCCGAAGCCCTCTTGAAGTTCAGAAGCTCTCTCAACGATGTCGTCGGTCTCAGCAATTGGGATACCGCCGTCAACCCTAAGCCCCCATGCGCGGGCAATATCCCAAATTGGGTTGGCGTTTTCTGCATCAATGACTCCGTTTGGGGCTTCCGTCTCGAGAATATGGGCCTCATGGGCAACATTGACGTCGATGCTCTTGCTTCCATGCCCCGTTTAAGGTCTATTAGCTTGATGAATAATTCCTTCGTAGGACCTTTGCCTGAAATCAAGCGCGTGAAGAATTTGAAGTCCATTTACTTATCGTACAACCATTTTTCCGACAGCATCCCCGACGATGCCTTTGTAGGTATGAATATGTTAAAGAAAGTTTATTTGGCAAATAACCAACTAACCGGAAAAATCCCTTCCTCCCTCGGCATCTTGCCTAATGTCCTCGCCGTCCGGCTCGACGGCAACAAGTTTCATGGCCGAATTCCTAATTTTCAAAACAGCAAGTTGAAGCTTATCGATTTATCTAACAATAATTTAGAAGGCCCCATTCCAGGGAATCTAACCTCTTTCAACGCCTTCGCCTTCTCGGTGATAATTGTTTCGGCGATCGTGATAGCCTGCCTGAGAATACGCCGGCGATACGGCGACGACGCTGTCTCGACGTTCCGAAGCCAGCCTTCTTTGAAGTATGCTGCTCCGGCATTCACGAAAGCGAAAAGCATAGTTTATCACCATGACAATGCAAAGCTTCTTGCTGAACAACAAAACAACAATAGTTATCAGCATACGCCGTCGACGAAGAAAGGCGAAGCCGGAAAGAAGGAAGAAAAACTCTTGCTCTCTGACTTCGTTCGAAAGGCTTGTTTAGCCAGCCATCTTCATGGTAATCATAGCGAGGAGCAGCCATGCTTAAACTGGCCAACTCGTTTGAAAATTGTGAAAGGAGTAGCTAGAGGTTTATCATACCTATTCTCTGCATTACCAAGCTTAGTGGTTCCTCACGGTCATTTAAAATCTTCAAACATTCTCTTAGACGAATCATACGAGCCCTTACTCACAGATTACGCTCTCATTCATGTCATAAATCTGGATCATGCTCAACAGATTATGATGCCGTACAAGTCGCCGGAATACGCGCAACTTGGCCGGATAACGAAGAAGACCGACGTATGGAGCTTCGGCATTGTTATTCTTGAGATCTTAACAGGGAAGTTCCCGGAGAACTATCTGATTCAGAGGCATGAACCTGGTTCGGATATAGCGAGTTGGGTGAATGGTATGATCACGGAGAAGCGTGCGAGTGAAGTGTTCGATGTCGAAATGGGAGGGATTGAGAATAATAAGAGTGAATTACTTAAGCTTTTGAAGATCGGATTGAGTTGTTGTGAAGAGAATGTGGAGAGAAGATTGGATATGAAAGAAGCTCTTGATAAGATTGAAGAGTTGAAGGATGAAAGTGATGGAGAATTTTCTTTGACTGTCACTGGTGAACGAGATGCTTTTCAAGTTATATAA 1626 0.4563 MGAHAALPVRVPAVTSDLLVLLLLLLLLLSWSSPSLSYTDAEALLKFRSSLNDVVGLSNWDTAVNPKPPCAGNIPNWVGVFCINDSVWGFRLENMGLMGNIDVDALASMPRLRSISLMNNSFVGPLPEIKRVKNLKSIYLSYNHFSDSIPDDAFVGMNMLKKVYLANNQLTGKIPSSLGILPNVLAVRLDGNKFHGRIPNFQNSKLKLIDLSNNNLEGPIPGNLTSFNAFAFSVIIVSAIVIACLRIRRRYGDDAVSTFRSQPSLKYAAPAFTKAKSIVYHHDNAKLLAEQQNNNSYQHTPSTKKGEAGKKEEKLLLSDFVRKACLASHLHGNHSEEQPCLNWPTRLKIVKGVARGLSYLFSALPSLVVPHGHLKSSNILLDESYEPLLTDYALIHVINLDHAQQIMMPYKSPEYAQLGRITKKTDVWSFGIVILEILTGKFPENYLIQRHEPGSDIASWVNGMITEKRASEVFDVEMGGIENNKSELLKLLKIGLSCCEENVERRLDMKEALDKIEELKDESDGEFSLTVTGERDAFQVI 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0788 541 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 310 525 - -
Lele39g0788 541 ProSiteProfiles Protein kinase domain profile. 245 519 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0788 541 FunFam Pollen receptor-like kinase 1 321 529 - -
Lele39g0788 541 Gene3D Transferase(Phosphotransferase) domain 1 322 535 - -
Lele39g0788 541 SUPERFAMILY L domain-like 67 226 - -
Lele39g0788 541 Gene3D Ribonuclease Inhibitor 37 234 IPR032675 -
Lele39g0788 541 Pfam Leucine rich repeat N-terminal domain 39 82 IPR013210 -
Lele39g0788 541 SUPERFAMILY Protein kinase-like (PK-like) 311 519 IPR011009 -
Lele39g0788 541 Pfam Leucine rich repeat 134 194 IPR001611 GO:0005515
Lele39g0788 541 Pfam Protein tyrosine and serine/threonine kinase 285 514 IPR001245 GO:0004672|GO:0006468
Lele39g0788 541 Coils Coil 502 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0788 Lele-ChrLele39 16934181 16937236 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0788 310 531 Receptor kinase-like Gene Family AT3G20190 57.399 7.86e-82 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele39g0788 PK_Tyr_Ser-Thr 3.6e-18 CL0016