Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0785 ATGGTTGTGTTTCATATGTGCAGTGCAGGTAATCATAGCGAGGAGCAGCCATGCTTAAACTGGTCAACTCATTTGAAAATTGTGAAAGGCGTAGCTAGAGGTTTATTATACCTATTCCCTATATTACCAAGCTTAGTGGTTCCTCATGGTCATTTAAAATCTTCAAACATTCTCTTAGACGAATCATATGAGCCCTTACTCACAGATTATGCTCTCATTCATGTCATAAATCTGGATCATGCTCAACAGATCATGATGCAGTACAAGTTGTGGGAATATGCACAACTCGGCCAGATAATGAAGAACACCGACGTATGGAGCTTCGGCATTGTTATTCTTGAGATCTTAACAAGGAAGTTCCTGGAGAACTATCTGACTCAGAGGCATGAACCTGGTTCAGATATATTAAGTTGGGTGAATGAGAATGTGGAGAGAAGATTGGATATGAAAGAAGCTCTTGATAAGATTGAAGAGTTGAAGGATGAAGTGATGGAGAATTTTCTTTGA 507 0.3925 MVVFHMCSAGNHSEEQPCLNWSTHLKIVKGVARGLLYLFPILPSLVVPHGHLKSSNILLDESYEPLLTDYALIHVINLDHAQQIMMQYKLWEYAQLGQIMKNTDVWSFGIVILEILTRKFLENYLTQRHEPGSDILSWVNENVERRLDMKEALDKIEELKDEVMENFL 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0785 168 SUPERFAMILY Protein kinase-like (PK-like) 16 159 IPR011009 -
Lele39g0785 168 Pfam Protein tyrosine and serine/threonine kinase 13 118 IPR001245 GO:0004672|GO:0006468
Lele39g0785 168 Gene3D Transferase(Phosphotransferase) domain 1 8 167 - -
Lele39g0785 168 Coils Coil 142 166 - -
Lele39g0785 168 ProSiteProfiles Protein kinase domain profile. 1 168 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0785 168 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 12 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0785 Lele-ChrLele39 16841783 16842396 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0785 10 146 Receptor kinase-like Gene Family AT3G20190 51.825 4.36e-46 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele39g0785 PK_Tyr_Ser-Thr 1e-10 CL0016