Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0780 ATGGCTAAGAGCCATTTCCGAGGAGTGTACAGTTTCTCTGTCACTCATGATAGTTCGATACCTCCTTTGGAATCTGCTTCAATTGACGTAAGGGGTTTACAAAAAGTTCCATCACCTGGTGCAAAGTCTTCAGCATCGGATTATGCACAAACCTTTCATGATAACGAGATTGCAAATCATCCAAATGCTGGAAGAAGCAACTCGGTTCTTGCTGTTCATTTTTCATTTGCAGATTTGCGGGCTGCTACGGGTAATTTTGCATCAAGTCGCCTTCTTGGTGAAGGATCCATTGGATGTGTTTACAGGGCAAAATATGCTGATGGAAAGGTTTTAGCTGTGAAAAAACTTGACTCTACCCATTTCCATGGAAGCTCTCCTGAGGGATTCTCTCAGATTATATCAAAAATTTCCCAGGTTCACCACCCAAATATTGCTGAGCTTGTTGGTTATTCTTCAGAACAAGGAGAAAACATGTTAGTATATGAGTATTTCCGAAATGGCTCTCTTCATGATTTTTTACATGTGTCAGACGACTTCAGCAAGCCACTGACATGGAACACCAGAGTCAAAATCGCACTAGTCACAGGTCGAGCAGTTGAGTACCTGCACGAAATTTGTTCTCCATCTATAGTTCATAAGAATATCAAGTCTTCCAATATTCTGCTTGACAATGAACTCAATCCCCATCTCTCAGACTATGGTTTGGCATCCTTCTATCAGCACACTAGCCAAAATCTTGGGGCAGGATATAGTGCACCTGAGTGTTCAAACGCTTATACCCTGAAGAGTGATGTTTATAGTTTTGGGGTAGTCATGCTGGAGCTGTTAACAGGTCGAAAGCCTATGGACAGGTCAAAGCCAAAATCAGCACAACCTCTTGTTCATTGGGCCACCCCTCAGCTTCATGACATTGATGCATTGGCAAAAATGGTGGATCCTTCCTTGCGAGGACTTTACCCTCCTAAATCACTTTCAAGGTTTGCTGATATCATTGCTCTTTGTGTTAAGCATGAACCCGAATTTCGGCCATCAATGTCGGAAGTGGTTCAGTCATTGGTAAGATTAGTTCAGCATTCAAATATGAACATGTGA 1092 0.4222 MAKSHFRGVYSFSVTHDSSIPPLESASIDVRGLQKVPSPGAKSSASDYAQTFHDNEIANHPNAGRSNSVLAVHFSFADLRAATGNFASSRLLGEGSIGCVYRAKYADGKVLAVKKLDSTHFHGSSPEGFSQIISKISQVHHPNIAELVGYSSEQGENMLVYEYFRNGSLHDFLHVSDDFSKPLTWNTRVKIALVTGRAVEYLHEICSPSIVHKNIKSSNILLDNELNPHLSDYGLASFYQHTSQNLGAGYSAPECSNAYTLKSDVYSFGVVMLELLTGRKPMDRSKPKSAQPLVHWATPQLHDIDALAKMVDPSLRGLYPPKSLSRFADIIALCVKHEPEFRPSMSEVVQSLVRLVQHSNMNM 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0780 363 SUPERFAMILY Protein kinase-like (PK-like) 68 352 IPR011009 -
Lele39g0780 363 ProSiteProfiles Protein kinase domain profile. 86 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0780 363 Gene3D Transferase(Phosphotransferase) domain 1 164 363 - -
Lele39g0780 363 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 164 363 - -
Lele39g0780 363 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 51 163 - -
Lele39g0780 363 PANTHER OS01G0253100 PROTEIN 60 360 IPR045271 -
Lele39g0780 363 Pfam Protein tyrosine and serine/threonine kinase 89 352 IPR001245 GO:0004672|GO:0006468
Lele39g0780 363 Gene3D Phosphorylase Kinase; domain 1 45 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0780 Lele-ChrLele39 16444665 16461311 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0780 33 363 Strubbelig Receptor Gene Family AT1G78980 66.766 4.79e-157 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Lele39g0780 PK_Tyr_Ser-Thr 1e-39 CL0016