Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0775 ATGATGGAGATAAACACTTCTACTTTTCAGGCTGCATACCCTTTTGGGGGTCATTCTTTCAGTGCAGCTGCAATTGAGTATGTGATTCTGAAGATGAAACTGCCACATCATGGGCCTCAGATAGTACTGCTTCTTGCTGTTGAAAAGTTCAAGGTGTCAGAGGAGCAAAGAAAGTTTGCAATTGATAGCCATGAGCCTCTAGTGACTTTTACTCTCAGCTGCGGAATCCGTGGCGGTGAGCAACAAGGGGAGATTGTTGGTTCACAAAAATGCTTCATTGCTTCGCCAGAAGTTTTGTGGATGATGCAAGTTTGGTTGTGCGCCAGAGCTTCCTCGGTTATTGCAATCTTGTCGTACATTCCTTCGATTCCCATTTCCACTATTTATTCCTGCCCGATATGGTCCCCTCCCCCACCAATACTCCTTAGTGATCCTGCAATTCCAGACCCAACCCCACCTGAAATACAAAAACATGAGATGCTCGCATTTTACAAAATGTTAACGGCCTCTATTAGGGAACAGAGTTCTATTTTGTCATCTGTGATTTCAAGCCCTAGCATGCATCTAGGAGTACTCACAACCGCTTCTCATGCTGTCAAGACTGGCACTATGTTTGTGGTCTACTACAAACAAAGGGCTAGCCAGTTTGTTATTCGTCTGAACAAATATCTAGAGGCAGTGAACAATAATATTCATGTTGGCTTGAAGTTCAAGATGAGATTTCAGGGAGATGACTCACTTGAGAGAAGTTTCTTCGGAACTGTTGTGAGAATCGCGGACTTGTCTCCCGACTGGCCAGACTCCAAATGGAGATCTTTGCAGGTCAAGTGGATCGAACCTGGGGGAATTGAAAAGCCAGAGTGCGTATCTCCTTGGGAGATAGAACCTCTAAAAAATGCTGATGTTGTGAATGTTTCTGATGCACCAATTAAGAGCAAAAGGTTCAAACCAGTTGCTTCACCATGGCCAGATTCTCAACTTTTGAGTGATTCTTCAAGTCTTCTTTCTGAACATGGAAAGGACAAAGCCAAGATATCAGCACTAGGGAGATTTCTGATGTTAATGGATTTTGAGTTTTTTCATGTTCGAAGCGGTTTGCATGTTCTGGCCGGAGGACCTAAAAGGTGGGATGAACCTGTGACAATTCACAGGCTAAGGCTAGAGAGGGTTTCTCCGGGGAAGACTGAGTCTTTTGTAGCTTCTTGTGATGTAAATGTTTCTGACCTAATAAAAATAAAGAGCAAAAGTGGCAAATTGGAAGGGATAAGGACTGTGCTATGTGAACTTGGTAGTCTCTCGACAAACTTGTTTGATGGTAAGTTATTTTTTATTAAGATTTCATTATTCTTGAACTTCACAGTTTTGATGTTAACTGCTAAATTCTTCCATGAATTGATGCCGAAGTTGTATGTATTGGGATGTATTGTCCTTAGAGTAACAGTGATGGCTATTTTTCGTAGAGTTTGA 1467 0.4219 MMEINTSTFQAAYPFGGHSFSAAAIEYVILKMKLPHHGPQIVLLLAVEKFKVSEEQRKFAIDSHEPLVTFTLSCGIRGGEQQGEIVGSQKCFIASPEVLWMMQVWLCARASSVIAILSYIPSIPISTIYSCPIWSPPPPILLSDPAIPDPTPPEIQKHEMLAFYKMLTASIREQSSILSSVISSPSMHLGVLTTASHAVKTGTMFVVYYKQRASQFVIRLNKYLEAVNNNIHVGLKFKMRFQGDDSLERSFFGTVVRIADLSPDWPDSKWRSLQVKWIEPGGIEKPECVSPWEIEPLKNADVVNVSDAPIKSKRFKPVASPWPDSQLLSDSSSLLSEHGKDKAKISALGRFLMLMDFEFFHVRSGLHVLAGGPKRWDEPVTIHRLRLERVSPGKTESFVASCDVNVSDLIKIKSKSGKLEGIRTVLCELGSLSTNLFDGKLFFIKISLFLNFTVLMLTAKFFHELMPKLYVLGCIVLRVTVMAIFRRV 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0775 488 Pfam Auxin response factor 195 274 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele39g0775 488 Pfam Protein of unknown function, DUF547 10 77 IPR006869 -
Lele39g0775 488 Gene3D - 230 302 - -
Lele39g0775 488 FunFam Auxin response factor 230 301 - -
Lele39g0775 488 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 172 330 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0775 Lele-ChrLele39 16345304 16358105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0775 172 329 B3 DNA Binding Superfamily AT3G61830 53.049 1.95e-46 167