Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0772 ATGAACGCCATATCATCGGCGACCACAGCAAGTTCCAGTTTCAGCAATAACAGTGTGTATAACCACTCTAGATGTAGATTCTCTTCGGATCTTCTTGGTTCCATTTCTTTTCCTAACATCAATTGGGATAATCGTTTTCGCCGGTGCCTCACTTCGTCGGAGCGTAAGTCTCGATTTCTGTTAGTTCCCAGGGCTGCGGCTCCAGATACTAGCAAGGAAAGCAAGAGTGAAAGTGCCCAAAATGTTGACAGTAGTGATGAGATTGAACTGACAGAGAAGCAGCAATCGCCGTCATCGCCACCGCCGTCTGTGTCGATTAGGTTGGACGACGTGAACCCGGTAGGTCTGGGTAGAAAATCGCGCCAATTGTTTGATGAGGTTTGGAGGAAGTTCTCGGGATTGGGTCAGATCTCTAGGACCATCCGTGCTGATGATCAGGAGGCTCTTGATGCTCTTCTCATCCGAGAAGGGCCCATGTGCGAGTTCGCAATCCCTGGCGCTCAGAATACTGTTGTGCTTGTTGTTGGTGCCACCAGTCGCATTGGTCGCATTGTTGTCCGTAAGCTCATGCTGAGGGGCTACACAGTGAAGGCTTTGGTAAGGAAGGATGATCCAGAGGTGGTGGACATGCTTCCCAGGTCCGTAGAGATAGTTATTGGGGATGTTGGTGAACCCGATACAGTCAAGGCTGCTGTGGAAGGTTGTAACAAAATAATATATTGTGCCACTGCTCGTTCTCCTATCACTGCTGATCTCTTTAGGGTTGATTACCGAGGAGTTTATAACCTTACTAAAGCATTTCAGGATTACAATAATAAATTGGCGCAATTACGGGCTGGTAAAAGCAGTAAGAGCAAGCTCTTGATTGCCAAATTTAAGTCTCCAGAGTCGTTGAATGGGTGGGAAGTTCGCCAAGGAACGTACTTCCAAGATACAATTGCCACAAAATATGATGGAGGGATGGATTCTAAATTTGAGTTCACTGAGACTGGTGAAGCTGTTTTCTCAGGGTATGTTTTCACAAGAGGAGGTTACGTTGAACTTTCAAAAAAGCTTTCTCTGCCTTTAGGTTGCACTCTTGACAGGTATGAGGGCCTGGTCCTCTCAGTTGGTGGAAATGGAAGATCTTATGTTATAATTCTAGAAGCTGGTCCTTCAGCAGATCCAAGTCAGAGCAAATTGTATTTTTCAAGAATTACCACAAAAGTGGGATTTTGTAGGGTTAGAGTGCCATTTGCATCATTCCGCCAAGTAAAACCAGATGATCCACCATTGGACCCTTTTCTTGTACATACGTTAACAATACGTTTTGAGCCAAGAAGACAGAGGCCTGTTGATGGACCTACAGCAAAGAGTCAAGATTTGAGAAGCTTTAAGCTTATATTTGAATATATAAAAGCCTTGCCTACGGGGCAAGAAACAGATTTTGTTCTCGTATCATGTTCTGGAAAGGGAATTGAAAGTTCAAGAAGGGAGCAAGTTCTTAAAGCCAAACAGGCTGGGGAAGATTCGTTGAGAAGATCTGGCCTCGGATACACAATAGTTCGTCCTGGTCCCCTAAAGGAAGAGCCTGGTGGTCAGCGTGCTCTAATATTTGACCAAGGAAACAGAGTATCTCAGGAAATCAGCTGTGCTGATGTGGCCGATATATGTGTTAAGGCACTACATGATTCGACTGCAAGAAACAAAAGCTTTGATGTATGTTACGAATACGTTGCTGAAGAAGGGAGGGAGCTTTATGAGCTGGTTGCTCACTTGCCTGACAAAGCAAATAACTACTTGACTCCAGCACTATCTGTCTTAGAGAAGAATACCTGA 1818 0.4494 MNAISSATTASSSFSNNSVYNHSRCRFSSDLLGSISFPNINWDNRFRRCLTSSERKSRFLLVPRAAAPDTSKESKSESAQNVDSSDEIELTEKQQSPSSPPPSVSIRLDDVNPVGLGRKSRQLFDEVWRKFSGLGQISRTIRADDQEALDALLIREGPMCEFAIPGAQNTVVLVVGATSRIGRIVVRKLMLRGYTVKALVRKDDPEVVDMLPRSVEIVIGDVGEPDTVKAAVEGCNKIIYCATARSPITADLFRVDYRGVYNLTKAFQDYNNKLAQLRAGKSSKSKLLIAKFKSPESLNGWEVRQGTYFQDTIATKYDGGMDSKFEFTETGEAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVGGNGRSYVIILEAGPSADPSQSKLYFSRITTKVGFCRVRVPFASFRQVKPDDPPLDPFLVHTLTIRFEPRRQRPVDGPTAKSQDLRSFKLIFEYIKALPTGQETDFVLVSCSGKGIESSRREQVLKAKQAGEDSLRRSGLGYTIVRPGPLKEEPGGQRALIFDQGNRVSQEISCADVADICVKALHDSTARNKSFDVCYEYVAEEGRELYELVAHLPDKANNYLTPALSVLEKNT 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0772 605 MobiDBLite consensus disorder prediction 91 105 - -
Lele39g0772 605 MobiDBLite consensus disorder prediction 64 111 - -
Lele39g0772 605 Pfam Complex I intermediate-associated protein 30 (CIA30) 318 418 IPR013857 -
Lele39g0772 605 Gene3D - 430 583 - -
Lele39g0772 605 Gene3D - 167 275 - -
Lele39g0772 605 PANTHER FLAVIN REDUCTASE-RELATED 168 588 - -
Lele39g0772 605 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 168 569 IPR036291 -
Lele39g0772 605 Pfam NAD(P)H-binding 492 557 IPR016040 -
Lele39g0772 605 Pfam NAD(P)H-binding 176 268 IPR016040 -
Lele39g0772 605 SUPERFAMILY Galactose-binding domain-like 288 435 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0772 Lele-ChrLele39 16299880 16312577 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g0772 39 16299880 16312577 Lele39g0772 39 16299880 16312577 ECH
Lele37g0657 37 5695225 5702409 Lele39g0772 39 16299880 16312577 hybridization
Lele38g0612 38 5219961 5232400 Lele39g0772 39 16299880 16312577 hybridization