Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0747 ATGGCTGATCTTCAAAAACACGCTGTCGAATTCCGGGATCCACGATGCGTTGATCTCAGGCTTCGCAGTGGTTGCCATTCCGCCGGAGAAGAAAAACCCACGACGACGCTAATAAATGGACCCAAAGAAGAGCCTGCTGCGGAGGAGGGCTCTGCGGAGGCGATGCAGGTTATGCCGGTGGCAGTGCACGTGCCGCCTAAGAAGGCTTCGACGAAGGACCGTCACACGAAGGTCGAGGGGCGAGGCCGGAGGATCCGAATGCCCGCCACGTGCGCCGCTCGGATCTTCCAGTTGACCCGGGAATTGGGTCACAAGTCCGACGGTGAAACCATCCGTTGGCTTCTTGAACATGCGGAGCCCGCCATCATCGCGGCCACCGGTAGCGGCACCGTCCCCGCGATAGCCATGTCCGTTAATGGAACCCTCAAAATCCCAACTACCACATCCATCAGCAACAAGCCGGAACCCGATGACCCACCCGAAAGAAAGAAACAAAAGCGAACGCCGAACAGTTCTCACGCAGAGCTGAGCGATGGCGTTTCCGTTTCCGTCGGCCTTGCCCCGATATCAACAACGGCGACGGCGATGACAAAGCCAAGCATCACAACAGTTAATCCCCAACAAGCGGCAATACCGTTAGCAAAAGGATTGGTCCCCATGTGGGCGATACCATCAAACGTCGTTGTTCCGGCGGGTACGTGCTTCTTAGTTCCACCGATGGGTTCCATCTCCGGAAATTCAACTAGCCAGCCACAGTTTTTCGCCATCCCCATGAGTGCGACGCCTCTGATCAACATTCCGGCGAGACCTATATCGGCTTTTGTCTCATTAATGGAGAAGAACATAGCAACGCCTGTTCAGTTCCCTACAGCGACAACAGTACCTCGGTGTTCAACTGTCCCGTCCGTAAAATCCCCCAAAGAAACGACGATTCCGGCACGGAGCTCGACCTCTGGTGCTACTACCTCAAGCACAACCCAGACGCTGAGAAAATTCTCATTAGAGATTTACGATAAGGAGGAGCTTCAACTCAAGTCCGGCAGTTCAAAGCAGTGA 1056 0.5492 MADLQKHAVEFRDPRCVDLRLRSGCHSAGEEKPTTTLINGPKEEPAAEEGSAEAMQVMPVAVHVPPKKASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGSGTVPAIAMSVNGTLKIPTTTSISNKPEPDDPPERKKQKRTPNSSHAELSDGVSVSVGLAPISTTATAMTKPSITTVNPQQAAIPLAKGLVPMWAIPSNVVVPAGTCFLVPPMGSISGNSTSQPQFFAIPMSATPLINIPARPISAFVSLMEKNIATPVQFPTATTVPRCSTVPSVKSPKETTIPARSSTSGATTSSTTQTLRKFSLEIYDKEELQLKSGSSKQ 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0747 351 MobiDBLite consensus disorder prediction 144 177 - -
Lele39g0747 351 MobiDBLite consensus disorder prediction 26 51 - -
Lele39g0747 351 MobiDBLite consensus disorder prediction 155 171 - -
Lele39g0747 351 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 57 274 IPR005333 GO:0003700
Lele39g0747 351 MobiDBLite consensus disorder prediction 297 327 - -
Lele39g0747 351 Pfam TCP family transcription factor 70 167 IPR017887 -
Lele39g0747 351 ProSiteProfiles TCP domain profile. 71 125 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0747 Lele-ChrLele39 15365403 15366458 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0747 1 343 TCP Transcription Factor Family AT2G45680 45.799 6.51e-76 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lele39g0747 TCP 6.3e-30 No_clan