Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele39g0725 | ATGGCCTTTTCTTGCGTGGATTTGTCTCTCGTTGATAAAAGTCGTGCTAGGGATTTGTTTTTGCCAATGATCTCTCTCACTCTTAAAGAATTTCTAGAATTATATGTGGGTTCTACCCCCAATCTTCGACGGTCTGTCTCTTTCTCTCCTACACCAGCGGACCCACTTCAATTACCCTCCCTTCTCGCGGCCACGCCTTTGAATTTGAACAACACCGACGAGAGCTTCATCGTCCATTGCTATGGTAGAAACCCTGTGACCTTCGGAAACTCATACGGATTTCCTTCGCCAATGGCTTCCAATGTTCACAGAAATGGCGCCCAAAGGGGCACTACGAAGCTCGATCGGATTGTTTCGGCGGGTACGAACCTTAAAGCGACGTCGTTTAAACCAAGGGTTCCTCCTTCGTCTCAGTCTCCGGGATCCACTCTTCGCCGGAGTAGCCCGGCCTCTTTGGCAACTAGAAACGGAGACGGAGTACCTGGAAGAGTTCGAGTGGCTGTAAGATTGAGACCTCAAAATGCTGAAGAAATGGTGGCGGATGCTGATTTTGCTGACTGCGTTGAATTGCAACCTGAGTTTAAGAGGTTGAAACTTCGGAAAAACAATTGGGATTCAGACACATATGAGTTTGATGAAGTATTTACTGAATTTGCATCACAGAAGCGTGTCTATGAAGTTGTTGCTAAGCCAGTAGTGGAGAGTGTTCTTGATGGGTATAATGGGACGGTAATGGCTTATGGCCAAACAGGCACTGGGAAAACTTTTACTGTTGGAGAATTGGGGGAAGACGACACATCCAATCGTGGCATCATGGTTCGTTCCATGGAGGATATTTTAGCAGATCTATCTCCAGAGACCGATTCAATCACTGTTTCGTACTTGCAGCTGTACATGGAGACTCTCCAGGACTTGCTTAATCCTGCGAATGATAACATTCCCATTGTGGAAGATCCAAGAACTGGTGATGTATCTTTGCCTGGGGCTACGCTTGTAGAAATTACGGACCAGCAGAGTTTTTTGGAGTTGCTAAGGGTGGGGGAAGCTCACCGTTTTGCTGCTAACACAAAGTTGAATACCGAATCTTCTCGTAGTCATGCTATTCTAATGGTACAAGTTAAGAGGTCTGTCTTAGAAAGTGAAGATATTACCTCTAATGAAAACAAGGACTCTTCTCATTTGACCAAACCGTCTAAACCACTTGTCCGAAAAAGCAAGCTGGTTTTGGTAGATTTGGCAGGTTCAGAGCGCATCCATAAGTCAGGGAGTGAAGGACAAATGCTAGAGGAAGCAAAATCTATAAATCTTTCACTTAGTGCATTGGGAAAATGTATTAATGCTCTAGCAGAGAACAGTTCTCATGTTCCAATTCGTGATTCGAAGCTCACCAGGTTGCTCAGAGATTCTTTTGGAGGTACTGCTAGGACTTCTTTGATTGTAACCGTTGGACCCTCTCCACGTCATCGAGGAGAGACAGGAAGTACCATACAGTTTGGCCAGAGGGCAATGAAAGTCGAGAATATGTTGAAAATAAAGGAGGAATTTGATTATAAAAGTTTGGCCCGGAGGTTTGAAGTACAAGTAGATAAGTTGATTGCGGAAAATGAAAGGCAGCAGAAAGCTTTTGAGGCTGAAGTTGAAAAAATAAATTTGGAGGCTCAGAGTCGTATAGCTGAAGTTGAGAGGAATTTTGCAGATGCATTGGAGAAAGAGAGGTTGAAATGTCAGTTGGAGTACATGGATTCAGTCAAGCAGTTGGAGCATAAGTTGGTATTGAGTCAAGAAAGACATGACTGCAATGGCTTTGTGGATGGTCATGGAGAGGAATCTGGGCCATCTTCTGCAGATGAAGTTTCTGAGATCAAAAGGGTGCTAAAAAATGAAACTAATCGTAGAAAGGCAGCTGAAGAAGAGGTAGAAATTCTAAAAAGTCAGCTGGGGAAACATTCACAGACAGAGGCTGGAGGTGATGTGGAGATTCTAAATATTCGCAGAATGCTGGAAGAGGAGGCTCATCAGAAAAAGAAACTTGAAGAAGAGATAATAATACTACGAAGTCAGTTATTACAATTGAACTATGAAGCTGATCAGATGAGAAGGTGTTTGGAAAGTGGAGGCTCTGGAAATGCATTTGCTGCCATGGATTCTGCCACGTCTCAAGCTGGGAATTCTCAACTCAGAGACAATGGGAGTGGTCAGAAGGCATCTGTTGCTACTCTTTTTGAACAAGTCGGATTGCAAAAGATATTGACATTACTGGAGTCGGATGATGCCAATGTAAGGATTCATGCAGTGAAAGTGGTTGCCAACCTGGCAGCTGAAGAGGCAAATCAGAAAAGAATTGTAGATGCTGGTGGTCTTACATCCTTACTTATGCTTCTTAGAAGATATGAGGATGAAACTGTTCGCAGGGTAGCAGCAGGGGCAATAGCCAATCTTGCAATGAATGAAGCCAATCAAGAACTTATTATGGCTGAAGGTGGAATTACTCTCTTATCAATGACTGCATCTGATGCTGAAGATCCACAAACTCTCCGAATGGTAGCTGGGGCTATTGCTAATCTCTGTGGAAATGAGAAGTTATTAATGAAGCTGAGATCTCAGGGTGGTATAAAGGCTTTACTGGGAATTGTAAGGTGTGGACATTCTGATGTTCTTTCCCAAGTTGCTCGAGGAATTGCTAACTTTGCAAAATGCGAGTCCCGAGCTTCTAGTCAAGGGATAAAAAGTGGCAGATCCTTTTTAGTGGAAGACGGTGCGCTTCCATGGATAGTGCAAAATGCTAATAATGAAGCTGCTCCAATCAGGCGCCACATTGAGCTTGCAATTTGCCACTTGGCACAGCATGAAGTGAATGCAAAAGACATGATAAGTGGAGGTGCCCTTTGGGAGCTTGTTCGGATTTCAAGGGATTGTTCACGAGAGGACATACGGAATCTTGCCCGTCGAACTCTAAATAATAGCCCGACATTTAAATCTGAATTGAGACGACTACGAATCGAGTATTGA | 3009 | 0.438 | MAFSCVDLSLVDKSRARDLFLPMISLTLKEFLELYVGSTPNLRRSVSFSPTPADPLQLPSLLAATPLNLNNTDESFIVHCYGRNPVTFGNSYGFPSPMASNVHRNGAQRGTTKLDRIVSAGTNLKATSFKPRVPPSSQSPGSTLRRSSPASLATRNGDGVPGRVRVAVRLRPQNAEEMVADADFADCVELQPEFKRLKLRKNNWDSDTYEFDEVFTEFASQKRVYEVVAKPVVESVLDGYNGTVMAYGQTGTGKTFTVGELGEDDTSNRGIMVRSMEDILADLSPETDSITVSYLQLYMETLQDLLNPANDNIPIVEDPRTGDVSLPGATLVEITDQQSFLELLRVGEAHRFAANTKLNTESSRSHAILMVQVKRSVLESEDITSNENKDSSHLTKPSKPLVRKSKLVLVDLAGSERIHKSGSEGQMLEEAKSINLSLSALGKCINALAENSSHVPIRDSKLTRLLRDSFGGTARTSLIVTVGPSPRHRGETGSTIQFGQRAMKVENMLKIKEEFDYKSLARRFEVQVDKLIAENERQQKAFEAEVEKINLEAQSRIAEVERNFADALEKERLKCQLEYMDSVKQLEHKLVLSQERHDCNGFVDGHGEESGPSSADEVSEIKRVLKNETNRRKAAEEEVEILKSQLGKHSQTEAGGDVEILNIRRMLEEEAHQKKKLEEEIIILRSQLLQLNYEADQMRRCLESGGSGNAFAAMDSATSQAGNSQLRDNGSGQKASVATLFEQVGLQKILTLLESDDANVRIHAVKVVANLAAEEANQKRIVDAGGLTSLLMLLRRYEDETVRRVAAGAIANLAMNEANQELIMAEGGITLLSMTASDAEDPQTLRMVAGAIANLCGNEKLLMKLRSQGGIKALLGIVRCGHSDVLSQVARGIANFAKCESRASSQGIKSGRSFLVEDGALPWIVQNANNEAAPIRRHIELAICHLAQHEVNAKDMISGGALWELVRISRDCSREDIRNLARRTLNNSPTFKSELRRLRIEY | 1002 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele39g0725 | 1002 | FunFam | Kinesin-like protein | 714 | 990 | - | - | |
| Lele39g0725 | 1002 | Coils | Coil | 660 | 694 | - | - | |
| Lele39g0725 | 1002 | SUPERFAMILY | ARM repeat | 734 | 987 | IPR016024 | - | |
| Lele39g0725 | 1002 | Pfam | Kinesin motor domain | 169 | 505 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
| Lele39g0725 | 1002 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 163 | 541 | IPR027417 | - | |
| Lele39g0725 | 1002 | ProSiteProfiles | Kinesin motor domain profile. | 163 | 505 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
| Lele39g0725 | 1002 | Pfam | Armadillo/beta-catenin-like repeat | 777 | 814 | IPR000225 | GO:0005515 | |
| Lele39g0725 | 1002 | ProSitePatterns | Kinesin motor domain signature. | 405 | 416 | IPR019821 | GO:0003777|GO:0005524|GO:0007018 | |
| Lele39g0725 | 1002 | Gene3D | - | 835 | 997 | IPR011989 | - | |
| Lele39g0725 | 1002 | PANTHER | CENTROMERE PROTEIN E | 163 | 721 | - | - | |
| Lele39g0725 | 1002 | MobiDBLite | consensus disorder prediction | 125 | 154 | - | - | |
| Lele39g0725 | 1002 | MobiDBLite | consensus disorder prediction | 125 | 159 | - | - | |
| Lele39g0725 | 1002 | FunFam | Kinesin-like protein | 155 | 535 | - | - | |
| Lele39g0725 | 1002 | Gene3D | - | 718 | 834 | IPR011989 | - | |
| Lele39g0725 | 1002 | PRINTS | Kinesin heavy chain signature | 406 | 424 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
| Lele39g0725 | 1002 | PRINTS | Kinesin heavy chain signature | 455 | 476 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
| Lele39g0725 | 1002 | PRINTS | Kinesin heavy chain signature | 239 | 260 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
| Lele39g0725 | 1002 | Gene3D | Kinesin motor domain | 158 | 535 | IPR036961 | - | |
| Lele39g0725 | 1002 | Coils | Coil | 618 | 652 | - | - | |
| Lele39g0725 | 1002 | CDD | KISc | 163 | 503 | - | - | |
| Lele39g0725 | 1002 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 785 | 828 | IPR000225 | GO:0005515 | |
| Lele39g0725 | 1002 | SMART | arm_5 | 774 | 815 | IPR000225 | GO:0005515 | |
| Lele39g0725 | 1002 | SMART | arm_5 | 816 | 857 | IPR000225 | GO:0005515 | |
| Lele39g0725 | 1002 | SMART | arm_5 | 858 | 898 | IPR000225 | GO:0005515 | |
| Lele39g0725 | 1002 | SMART | arm_5 | 734 | 773 | IPR000225 | GO:0005515 | |
| Lele39g0725 | 1002 | SMART | kinesin_4 | 161 | 513 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
| Lele39g0725 | 1002 | Coils | Coil | 521 | 570 | - | - | |
| Lele39g0725 | 1002 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 744 | 786 | IPR000225 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele39g0725 | Lele-ChrLele39 | 11128585 | 11173804 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele39g0725 | 158 | 507 | Calmodulin-binding Proteins | AT5G65930 | 34.877 | 8.37e-46 | 177 |