Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0719 ATGATGATGCAGGCGCGCCGAATAGCAGAAAGTTTTGCTTTGTCTATTAACAACAATCCCCAAAGTCGTCTTGGTTCACCTACGCGGCTCTGGGTTTGGCTGCAAATTTTCAGAGTATTGAAAGCTTACTTGATCGCGAAGAATTTACCAATGAAACGGGAAGTGCAGCTAGAGCCGCCAGTTACGCAAAGCCTTGGGGATTCCGACCCTCTACTCGATAATCATGAGGAGGAGGAGTGCCCAGGAAGCACGAGTGAAATTAAGAGTGATGATGTCGAGGCTGGTTTACTTCCTTCTTGTCGAATTTGCCTGGAAAGCGATTCCGACCCAGGTGATGAATTGATATCACCGTGCATGTGCAAGGGGACCCAACAGTTTGTCCATCGTTCATGTCTTGATCACTGGCGCTCAGTAAAGGAAGGATTTGCCTTCTCACACTGCACCACTTGCAAAGCCCAATTTCATCTTCGAGTTGAATCGTTTGAGGACAACTCCTGGCGTAAAATAAAGTTCAGGCTTTTTGTGGCAAGGGACGTTTTTCTTGTATTTTTGGCTGTACAAACTGTGATAGCGGCAATGGGTGCCTTTGCATACCTTATGGACAAAGATGGGGCATTCAGGAACTCTTTCGATGATGGTTGGGATAGGATACTGTCAAACCATCCTATACCATTTTATTACACTATTGGAGTACTAGCCTTCTTTGTGCTGCTTGGATTTTTTGGTCTCATTCTACATTGTTCCTCCCTAAGTGCTAATGACTCCAGAGTGGTCGGGTGTCAGAACTGTTGTTATGGATGGGGCATTTTGGATTGCTTTCCTGCATCAATGGAGGCATGCTTTGCTCTTGTGGTTGTTTTTGTAGTCATCTTTGCAATTTTGGGTATAGCTTATAGTTTCCTGGCAGCCACCATGGCGATTCAAAGAATTTGGCAGAGACACTACCACATACTGACCAAGAGGGAGCTAACTCAGGAATATGTTGTTGAGGATCTTCAAGGTTCTTATTCCCCACCAAAGTTGGACCCAGAACACGAAGAGCGCTTGAAAATGCTCAAGCTTTTGTGA 1068 0.4522 MMMQARRIAESFALSINNNPQSRLGSPTRLWVWLQIFRVLKAYLIAKNLPMKREVQLEPPVTQSLGDSDPLLDNHEEEECPGSTSEIKSDDVEAGLLPSCRICLESDSDPGDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRVESFEDNSWRKIKFRLFVARDVFLVFLAVQTVIAAMGAFAYLMDKDGAFRNSFDDGWDRILSNHPIPFYYTIGVLAFFVLLGFFGLILHCSSLSANDSRVVGCQNCCYGWGILDCFPASMEACFALVVVFVVIFAILGIAYSFLAATMAIQRIWQRHYHILTKRELTQEYVVEDLQGSYSPPKLDPEHEERLKMLKLL 355
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0719 355 Pfam RING-variant domain 100 150 IPR011016 GO:0008270
Lele39g0719 355 CDD RING_CH-C4HC3_MARCH 100 151 - -
Lele39g0719 355 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 83 163 IPR013083 -
Lele39g0719 355 SUPERFAMILY RING/U-box 98 155 - -
Lele39g0719 355 SMART ringv_2 99 151 IPR011016 GO:0008270
Lele39g0719 355 ProSiteProfiles Zinc finger RING-CH-type profile. 92 157 IPR011016 GO:0008270
Lele39g0719 355 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 66 355 - -
Lele39g0719 355 MobiDBLite consensus disorder prediction 60 87 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele39g0719 Lele-ChrLele39 9385950 9391202 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0719 51 355 C3H Transcription Factor Family AT1G11020 75.625 3.91e-166 464