Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0717 ATGAAGGCTGTGCCCCTACCCTTTGAGGAATTTCGAGGGAAAGGGGTTTTGGATTTTGGTTCTGTAACTTCAGATTTGTTCTTCAAGTGGAATCATAATCATCATAGCAACAATATTCTTCAAGAGCATTGCTATGTGGGCACTGAGCCCACCTCTGTTTTGAACCTCAGAAGAAACCCGAGCCCTCAGACTTCCTCCTCCACACTGTTTTCCTCACACGGTGGTGGCGGCAGCTGCAGCGGCGCCACCGGCTCCACTGACAGTTCCACGGGTGCGGCGAAGGTCTCCGGCGACAACCCACCTCCTCACACCGCGTTAGACGCCGCTCCTCTGGCGGCGCTGGAAAGATGTGGGATGGGAGTGGAGGACTGGGAGAGCGTCTTGTCTGAGTCGCCTGGTCAAGATCAGTCCATCTTGAGGATGATTATGGGTGACATTGAAGACCCATCTGTGGGATTAAGCAAGCTTTTGCAGAGTGAAGCTGGCTCTCACCAAGATGTCATCGATTTCAATGGAGGAGGAGGGGGGGCTTTCGGTGTTGTGGATCAAAGCTCTGTTCTTGACCATATTTCTGGTGCTAATTTTGCAAGCAGCATTGAAGCTTCCGGAATTCCTTCTGGGAATTGTTCTGATTTTCCTTTCAATACCATCCACAACGTTAGCTTCAATAGTACTATGGCGAGAGTTGGTTCTTCTGTGAATCAAGGCCCCATTTTCCCTCCTTCGCTAACTTCACTTCCTCCGGATATGTTTCAGCCTCAGCAACAACAGCAAGCTATGGAGTCTGTGGACGAGAAGCCACAAATCCTCAATCACCAGTTCATTTTGAACCAAAATCAAGCTCAGTTTATGCAGAATCCGGCTTTTGTTATGCCGTTGCCGTATGAACACCAGCTTCTTGCTCAGCCTCCGGCGAAACGGCCTAATTGCGGTCCTATCAGGCCAAATTACCAGGTTCTGAAGCCACCATTTCTAGATCCTGGACATGAGATATATCTCCGGCGGGGACAGCAACCTCCGCTTCAGTTGCTTCCTCATCATCTTCAGCAGCAACGCCAGGCATCTCCGGCGATGGCTCCGAAGCCAAAAATGGCGAGCCACGGTGAAGAATTGGTGACCCACCAGCTTCAGCAGAGTGTGATGGACAAGCTGTTCAAGGCCACAGAGATGATCGAAACCGGTAATCCGGAACTCGCGCAAGGGATATTGGCGCGGCTCAATCACCAACTTTCTCCAATTGGTAAGCCTTTCCAAAGGGCTGCTTTTTACATGAAGGAGGCCTTGCAATCGCTTCTTCTCCAATTGAACCACACCACCACCACCACCAACAATTCTTTGACCTTCTCTCCTAGTGGCCTTGTCCTCAAGATTGGAGCTTGCAAATCGTTCTCAGAAATCACCCCAGTTCTCCAATTCTCCAATTTCACTTGCAACCAAGCACTTCTTGAAGCTGTTGAAGGGTATGATCGAATTCATATTATGGATTTTGACATTGGGTTTGGTGGACAGTGGGCTTCTTTCATGCAAGAGCTAGCTCTCAGGAATGGTGGTTCACCTTCTCTGAAAATCACTGCCTTTGTATCACCCTCCAATTATGACGAAATCGAGCTCAGTTTCACTCAAGAAATTCTGAAACAATATGCTTCTGATCTTAGCGTACCCTTCGAGCTTGAAATTGTAAACCTTGAGTCATTGAACACTGCTTCTTGGCCACAACCTCTTCGGGACTGTGAAGCCATTGCTGTTAATTTGCCCATCGCTTCCTTCTCACATTGCCCATCATATCTCTCTTTGGTCCTTCGTTTTCTGAAGCAGCTCATGCCGAAAATTGTTGTCACTGTTGATAGGCCTTGTGATCGAACCGATGCCCCATTTGCTCAACACCTGATTTACGCTCTTCAATCTTATTCAGTGCTTCTTGAGTCACTTGATGCTGTTAGTGTGAACCTTGATGTTCTTCAGATGATTGAGAAATACCTTGTTCAACCAGCAATGGAGAAGCTGGTTTTGGGTCGCCACAGGTTGCAGTTACAAGAAAGAACACCACAATGGAAAACCATGCTTCTTACATCCGGGTTTTCGCTGTTGACGCTGAGTAACTTCACAGAATCTCAAGCAGAATGTTTGGTTCAGAGGAATCCTGGAAGGGGATTTCATGTGGAGAAGAAGCAGTCTTCTCTTGTTCTATGCTGGCAGAGGAAGGAACTAATCTCAGTTTCAACATGGGGATGCTAA 2235 0.4787 MKAVPLPFEEFRGKGVLDFGSVTSDLFFKWNHNHHSNNILQEHCYVGTEPTSVLNLRRNPSPQTSSSTLFSSHGGGGSCSGATGSTDSSTGAAKVSGDNPPPHTALDAAPLAALERCGMGVEDWESVLSESPGQDQSILRMIMGDIEDPSVGLSKLLQSEAGSHQDVIDFNGGGGGAFGVVDQSSVLDHISGANFASSIEASGIPSGNCSDFPFNTIHNVSFNSTMARVGSSVNQGPIFPPSLTSLPPDMFQPQQQQQAMESVDEKPQILNHQFILNQNQAQFMQNPAFVMPLPYEHQLLAQPPAKRPNCGPIRPNYQVLKPPFLDPGHEIYLRRGQQPPLQLLPHHLQQQRQASPAMAPKPKMASHGEELVTHQLQQSVMDKLFKATEMIETGNPELAQGILARLNHQLSPIGKPFQRAAFYMKEALQSLLLQLNHTTTTTNNSLTFSPSGLVLKIGACKSFSEITPVLQFSNFTCNQALLEAVEGYDRIHIMDFDIGFGGQWASFMQELALRNGGSPSLKITAFVSPSNYDEIELSFTQEILKQYASDLSVPFELEIVNLESLNTASWPQPLRDCEAIAVNLPIASFSHCPSYLSLVLRFLKQLMPKIVVTVDRPCDRTDAPFAQHLIYALQSYSVLLESLDAVSVNLDVLQMIEKYLVQPAMEKLVLGRHRLQLQERTPQWKTMLLTSGFSLLTLSNFTESQAECLVQRNPGRGFHVEKKQSSLVLCWQRKELISVSTWGC 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0717 744 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 349 739 IPR005202 -
Lele39g0717 744 MobiDBLite consensus disorder prediction 55 95 - -
Lele39g0717 744 ProSiteProfiles GRAS family profile. 371 743 IPR005202 -
Lele39g0717 744 MobiDBLite consensus disorder prediction 55 106 - -
Lele39g0717 744 Pfam GRAS domain family 382 742 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0717 Lele-ChrLele39 9212024 9214258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0717 380 744 GRAS Transcription Factor Family AT4G00150 56.403 1.76e-134 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele39g0717 GRAS 1e-92 CL0063