Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0703 ATGGTGATGAATCAGCTACAAAATAACCCAAATGATTCTGTTATGACTATGAGCACCATGCGAGCACGACCTGAGGAAATCCCTAAGCCTCCACCGGCTAACAGACCTCCAGAGAAGAGACAGAGAGTTCCATCTGCTTACAATCGCTTCATCAAGGACGAGATCCAACGTATCAAAGCTGGGAATCCTGATATAAGCCACAGAGAGGCTTTCAGTGCTGCGGCAAAGAATTGGGCCCATTTCCCCCATATCCACTTCGGACTGATGCCTGATCATCAACCCGTGAAGAAAGCTAATGTCCACCAGGAAGGAGAGGACGTGCTTACGAAAGATGGATTTTTCGCTCCAGCAAACGTAGGGGTCTCCCCATTTTAG 375 0.4827 MVMNQLQNNPNDSVMTMSTMRARPEEIPKPPPANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQPVKKANVHQEGEDVLTKDGFFAPANVGVSPF 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0703 124 SUPERFAMILY HMG-box 33 82 IPR036910 -
Lele39g0703 124 MobiDBLite consensus disorder prediction 1 44 - -
Lele39g0703 124 FunFam Axial regulator YABBY 33 105 - -
Lele39g0703 124 Gene3D High mobility group box domain 23 85 IPR036910 -
Lele39g0703 124 PANTHER PROTEIN YABBY 6-RELATED 16 100 IPR006780 GO:0007275
Lele39g0703 124 MobiDBLite consensus disorder prediction 1 18 - -
Lele39g0703 124 Pfam YABBY protein 15 88 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0703 Lele-ChrLele39 8407590 8410246 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0703 26 124 C2C2-YABBY Transcription Factor Family AT2G45190 81.553 3.72e-55 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Lele39g0703 YABBY 2.2e-40 CL0114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g0703 39 8407590 8410246 Lele39g0703 39 8407590 8410246 ECH