Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0700 ATGAGGAAGATTAGGGGATTTAAGCTTGGACGACGCCTTATCCGAATCTCCAGATGGATCTTCCGAAGAACCCGACCCGGAGGATATCGGAGGTTGGGTTCGCATGATTCGCCGGCGACAAAGACCGTAACGAAGATTATCAAATGGGGACGCAAGCTTACGAGAGGAGCCAGATCCTTCTGTAGCGCGAAGCCCAGGTTGGGATATATTCCGGTAGGATCCGACCCGTTACAGGACAAGCCTCCTGCAGTGCCGAAGGGTCACTTGGCGGTGTACGTTGGACAGAAGGACGGCGAGTTTCACCGCGTGCTGGTGCCAGTGATATACTTCAACCACCCCTTGTTTGGAGACTTGCTGAGGGAAGCGGAGGAGGAGTTCGGGTACAACCATCCCGGCGGGATCACGATTCCGTGTCCGTTCACTGAGTTTGAACAGGTCAAGACCCGAATAGCATCCGGGTCATCCGGAACGGGGCGGAGATTAGCTTCGAGAGGGCCCCATTGA 504 0.5536 MRKIRGFKLGRRLIRISRWIFRRTRPGGYRRLGSHDSPATKTVTKIIKWGRKLTRGARSFCSAKPRLGYIPVGSDPLQDKPPAVPKGHLAVYVGQKDGEFHRVLVPVIYFNHPLFGDLLREAEEEFGYNHPGGITIPCPFTEFEQVKTRIASGSSGTGRRLASRGPH 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0700 167 Pfam Auxin responsive protein 65 147 IPR003676 GO:0009733
Lele39g0700 167 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 61 145 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0700 Lele-ChrLele39 8301308 8301811 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0700 81 143 Calmodulin-binding Proteins AT3G43120 50.794 2.36e-16 70.5