Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0696 ATGGATGAAAAAGTTCCTGTGCTGGCCACTATTTCCTTCGTAAGTGGATTCGCAATAACAAGCGTACTTGTCTTCATATTTGCAGCTATTGTTCAATATGGCAAAACATTGAGACAAGTTTTGATTAGGAAAATAAAACGAGAAGAAAAGCAGGGGAATAAGCATGGCGATTTTACTACAATATGGAATTTTGATGGTCATGTTGCATTTGAAGATATCATTAAAGCAACCACCGATTTTGATATTAAATACTGCATAGGAAGAGGTGCTTCTGGGGAGGTTTACAAGGCAAAACTTGCATGTGGAAAAATTGTTGCAGTGAAGAAACTTCGCTACATGCTATCAGAAAATCTGCGATTTGAAAAAAGTTTTTACAACGAGATCGAGATTTTGACAGAGATTCGTCATCGAAACATTGTTAAGCTCCATGGCTTTTGTATAAATATGCAGTGCACGTTTCTGGTTTATGCATTTATGGAAAGTGGTAGCCTCTTACATGTCTTGAGAAATTATGAAAAGGCTCAAAAGTTAACATGGAGCAAGAGATTCAATATTGTTAACGGCATTGCTCATGCTGTAAAATATATGCATCATGATTGTGCCGTACCAATTATTCATCGAGACATAACAAGTGGTAATATCTTGTTGGACTCAGATATGGAAGCATTTGTCTCAGACTTTGGCACAGCTAGGCTCCTGGACCCATTTTCATTAAATCAAAGCGTTTTAGTTGGCACTTATGGTTATGTTGCTCCAGAGTTAGCATATACATTAGCAGTGACCGAAAAGTGTGATGTCTATAGCTTTGGAGTAGTTGCGTTAGAAACTATGATCGGAAAGCACTCAGGAGAGTTGATTTCATGTTTAAGAAAGGATTTTACAGATCAAAAGATTATGCTAAAAGATATCTTAGACACCCGACTACCTCAGCCTCGCACTCGGGAAGATATTTGGGATGTAATTCTTGTGATGACTATTGCATTAGCATGCATTTGTGCTGAACCAGATTGTAGGCCATCGATGGAGCAAGTGACTAAGAAACTTTCACTTTCTAGGCCGCTTTTTACACTTTCATTCAATGATATTTCAGTTCACCAGTTGATGAATCAAGACATAATTTCATCTACGCAACAAGATCTAGGAGAATTTTAA 1152 0.3741 MDEKVPVLATISFVSGFAITSVLVFIFAAIVQYGKTLRQVLIRKIKREEKQGNKHGDFTTIWNFDGHVAFEDIIKATTDFDIKYCIGRGASGEVYKAKLACGKIVAVKKLRYMLSENLRFEKSFYNEIEILTEIRHRNIVKLHGFCINMQCTFLVYAFMESGSLLHVLRNYEKAQKLTWSKRFNIVNGIAHAVKYMHHDCAVPIIHRDITSGNILLDSDMEAFVSDFGTARLLDPFSLNQSVLVGTYGYVAPELAYTLAVTEKCDVYSFGVVALETMIGKHSGELISCLRKDFTDQKIMLKDILDTRLPQPRTREDIWDVILVMTIALACICAEPDCRPSMEQVTKKLSLSRPLFTLSFNDISVHQLMNQDIISSTQQDLGEF 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0696 383 ProSitePatterns Protein kinases ATP-binding region signature. 86 109 IPR017441 GO:0005524
Lele39g0696 383 Gene3D Transferase(Phosphotransferase) domain 1 159 356 - -
Lele39g0696 383 PANTHER LEUCINE RICH REPEAT KINASE 2 21 350 - -
Lele39g0696 383 FunFam Leucine-rich repeat receptor protein kinase MSP1 43 158 - -
Lele39g0696 383 Pfam Protein kinase domain 84 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0696 383 ProSiteProfiles Protein kinase domain profile. 80 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0696 383 SUPERFAMILY Protein kinase-like (PK-like) 63 348 IPR011009 -
Lele39g0696 383 FunFam MDIS1-interacting receptor like kinase 2 159 353 - -
Lele39g0696 383 ProSitePatterns Tyrosine protein kinases specific active-site signature. 204 216 IPR008266 GO:0004672|GO:0006468
Lele39g0696 383 Gene3D Phosphorylase Kinase; domain 1 37 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0696 Lele-ChrLele39 8218188 8220045 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0696 2 252 Receptor kinase-like Gene Family AT4G08850 48.425 2.13e-67 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele39g0696 Pkinase 1.4e-41 CL0016