Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0687 ATGCCGTCTCTGCTTCCGCACTTCCTGCTCAACCTTCCTCTTCTACTGTTCCTCTTCCCCATTCTCGCTTCTCCTTCGGAGCTTGATACTCTCATGGCTATCAAATTCTCTCTCGACCCACAGAACCGCTTTCTGACCTCATGGACTCCACATTCTGACCCATGTGGTGGCGCTTTCGAGGGCGTAGCATGCAACGAGCAAGGCCACGTCGTCAATATTTCGCTTCAAGGAAAGGGTCTCTCCGGCAGCATTCCCGCAGCCGTGGGTGATCTCAAGAGCTTGACGGGTCTCTATCTGCACTTCAATGCTCTGAGCGGGACGATACCCGAGGAAATTGTGAATTTGAGTGACCTGAACGATTTGTATCTCAATGTCAATAATCTCTACGGTGATATCCCTCGTGAGATTGGGAATATGTCTAATCTTCAAGTTTTGCAGCTTTGTTATAATAAATTTACTGGGAGTATTCCAACCGAATTGGGAAACTTGGAGAGACTTAATGTTCTTGCTCTGCAATATAATCAGTTGAGTGGTGCAATTCCTGCTAGTTTGGGTCAATTGCAGTCACTAACGAGGTTGGATCTGAGCTTTAATAACCTTTTTGGCCCTATTCCAGTGAGACTAGCTGACGCGCCCAAACTAGAAAGCCTTGATATTCAAAACAATTCTCTCTCAGGCATTGTCCCTGCAGCTCTTGGAAGACTGAGAGGTGGTTTTCGGTACATCAACAACCCTGGATTATGTGGGACTGGATTTACCAATTTGGTTGCTTGTAAATCTTTATTTGATCCTAGTAAGCCTGAACCATTTGAACCTGATAACTTTTCCACGAAGGATCTTCCAGCATCAGTTGAACCAAAGGATGAAAAGTGCAGTGATGAAACCCACTGTAAAAAGTCATTGCAATATTCAAGAATGGCTTTGGTTTTTGGAGTGATCGGAATTATTGTTGCTTCCACAGTTTCTGGACTTTCCATGTTTGTGTGGTACCGTCTTCAAAAAAAGAAGATCAGAAACACTATTGATGCTTCTGATAGCCGCGTTAGCAGGAAAAATGCAGCGCCTTTGATCAGTTTGGAATATTCTAATGGGTGGGATCCATTAGCCAAAGGTAAAAATACTTACTCCCAGGAAATTCTAGAGAGCTTTATGTTCAATCTAGAGGAGGTAGAACGTGCTACTCAGTGCTTCTCTGAGGTGAATTTGTTGGGGAAGAGTAATATGTCAGGAATTTACAGGGGAATTTTTAGAGATGGATCAGTTGTGGTTGTAAAATGCATCAACATGACCAGCTGCAAGTCTGATGAAACTGAGTTCTTGAAGGGGTTGAAGATATTGACCTCGTTAAAACACGAAAATCTCATTCGCTTGAGAGGGTTTTGCTGTTCTAAAGGCAGGGGAGAGTGCTTTCTCGTTTATGATTTTGCCCCAAATGGGAGTTTGTCTCAGTATTTGGATCTCAAGAAAAGTGATACTAAGATTCTGGAATGGTCTACCAGAGTATCCATCATCCATGGTATTGCTAGAGGTATTGGTTATCTGCATGGCAAGAAGCGAAGAAAACAGGCTCTAGTTCACCAGAATATATCAGCTGAAAATGTGCTTCTTGATGCACATTACAATTCATTACTTAGAGATTCAGGATTGCACAAACTCCTTGCTGATGATGTTGTCTTCTCCACCCTGAAAGCTTCTGCTGCCATGGGATACCTTGCTCCAGAATACGCGACCACCGGTTGTCTAACTGAAAAAAGCGACATATATGCTTTCGGGGTGATAGTTTTCCAGCTTCTTACTGGAAAGAGCGATATCGATATTACTCAATTATATCATTACCAGGAAGAAGCATCTGGTTTTAATGATATGGTTGATGGAAACCTTGAAGGTAGATTTTCAGGATCAGAGGCAGCTAAACTAGGGAGTATTGCTCTACTTTGCACACATGAATCGCCCCATGAACGACCATCTATGGACCATGTAATGCAAGAACTGACAGAGAAGGGTAAGCACCAAACAGTTCCCCACATTAAGAATGAAAATCTTGCCTTGTCTTTGAAGTAG 2061 0.4294 MPSLLPHFLLNLPLLLFLFPILASPSELDTLMAIKFSLDPQNRFLTSWTPHSDPCGGAFEGVACNEQGHVVNISLQGKGLSGSIPAAVGDLKSLTGLYLHFNALSGTIPEEIVNLSDLNDLYLNVNNLYGDIPREIGNMSNLQVLQLCYNKFTGSIPTELGNLERLNVLALQYNQLSGAIPASLGQLQSLTRLDLSFNNLFGPIPVRLADAPKLESLDIQNNSLSGIVPAALGRLRGGFRYINNPGLCGTGFTNLVACKSLFDPSKPEPFEPDNFSTKDLPASVEPKDEKCSDETHCKKSLQYSRMALVFGVIGIIVASTVSGLSMFVWYRLQKKKIRNTIDASDSRVSRKNAAPLISLEYSNGWDPLAKGKNTYSQEILESFMFNLEEVERATQCFSEVNLLGKSNMSGIYRGIFRDGSVVVVKCINMTSCKSDETEFLKGLKILTSLKHENLIRLRGFCCSKGRGECFLVYDFAPNGSLSQYLDLKKSDTKILEWSTRVSIIHGIARGIGYLHGKKRRKQALVHQNISAENVLLDAHYNSLLRDSGLHKLLADDVVFSTLKASAAMGYLAPEYATTGCLTEKSDIYAFGVIVFQLLTGKSDIDITQLYHYQEEASGFNDMVDGNLEGRFSGSEAAKLGSIALLCTHESPHERPSMDHVMQELTEKGKHQTVPHIKNENLALSLK 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0687 686 SUPERFAMILY Protein kinase-like (PK-like) 373 671 IPR011009 -
Lele39g0687 686 SMART LRR_typ_2 187 211 IPR003591 -
Lele39g0687 686 SMART LRR_typ_2 139 163 IPR003591 -
Lele39g0687 686 SMART LRR_typ_2 212 234 IPR003591 -
Lele39g0687 686 SMART LRR_typ_2 91 115 IPR003591 -
Lele39g0687 686 Gene3D Phosphorylase Kinase; domain 1 368 475 - -
Lele39g0687 686 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Lele39g0687 686 FunFam Protein NSP-INTERACTING KINASE 2 369 475 - -
Lele39g0687 686 Pfam Protein tyrosine and serine/threonine kinase 401 664 IPR001245 GO:0004672|GO:0006468
Lele39g0687 686 Pfam Leucine rich repeat 140 200 IPR001611 GO:0005515
Lele39g0687 686 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 71 666 - -
Lele39g0687 686 Gene3D Ribonuclease Inhibitor 22 256 IPR032675 -
Lele39g0687 686 ProSiteProfiles Protein kinase domain profile. 397 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0687 686 Gene3D Transferase(Phosphotransferase) domain 1 476 682 - -
Lele39g0687 686 CDD STKc_IRAK 403 666 - -
Lele39g0687 686 FunFam Leucine-rich repeat receptor-like kinase 26 135 - -
Lele39g0687 686 Pfam Leucine Rich Repeat 213 234 IPR001611 GO:0005515
Lele39g0687 686 FunFam Protein NSP-INTERACTING KINASE 2 137 259 - -
Lele39g0687 686 SUPERFAMILY L domain-like 25 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0687 Lele-ChrLele39 7924232 7927810 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0687 14 510 Miscellaneous Gene Families AT4G22730 49.809 1.64e-177 514
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Lele39g0687 PK_Tyr_Ser-Thr 1.6e-35 CL0016