Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0659 ATGGCTCATTTCACTCTTCAGCTTCCATTAACCTCTCAATTGTTCAAGCCTCTTGTGGCGTTCTTTTCATTCTTGCTCATAGTGAGAGCTTCCTCTGCTTGTTCAACAAGCCCAGAAAGTGGTGCTTGTGGACATGGAAGTCCAGTAGGACAACCATTTTCTTTAGTGATATCAGCAGGAGGCTCTCCTATATATCAATCAGGCAAAGGCTGTGGAGGTTGCTATGAGTGCACGTCGAGTCGAGCATGTTCAGGTAACCCAGTGACGATGGTGCTAACTGATGAGTGTCCTAGGTATGGTTCTGCTCAGAGATTTCACTTTGATTTGAGTGGCACTGATTTTGGTAGCATGGCTGTTTCTGGTCGAGCAGATCAACTTCGCAATGCTGGTAAGTTGGAGATTCAGTAG 408 0.4583 MAHFTLQLPLTSQLFKPLVAFFSFLLIVRASSACSTSPESGACGHGSPVGQPFSLVISAGGSPIYQSGKGCGGCYECTSSRACSGNPVTMVLTDECPRYGSAQRFHFDLSGTDFGSMAVSGRADQLRNAGKLEIQ 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0659 135 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 40 135 IPR007112 -
Lele39g0659 135 Pfam Lytic transglycolase 58 132 IPR009009 -
Lele39g0659 135 Gene3D - 28 135 IPR036908 -
Lele39g0659 135 SUPERFAMILY Barwin-like endoglucanases 29 135 IPR036908 -
Lele39g0659 135 PRINTS Major pollen allergen Lol pI signature 118 133 IPR005795 GO:0005576|GO:0019953
Lele39g0659 135 PRINTS Major pollen allergen Lol pI signature 59 70 IPR005795 GO:0005576|GO:0019953
Lele39g0659 135 PRINTS Major pollen allergen Lol pI signature 96 111 IPR005795 GO:0005576|GO:0019953
Lele39g0659 135 PANTHER EXPANSIN-B3 35 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0659 Lele-ChrLele39 6857304 6858026 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0659 39 134 Expansin Gene Family AT1G65680 58.586 1.72e-33 116