Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0625 ATGCACCTGATGGATCCGAACATGACTTCATATGTACGCGAAGAAGGCAGAAGCGAGCTTCATAAACAAGTCCAAGATGCAACATTACAGGCACTGCTATGCGTTGCACTGTTTAGACGAGGAGGGTCGAATGAACTGAGGAGGAGGTATAAGGAGAGAGGCGAGAACGTGGGCGCGTGGAGGCAAGCCTGTTGTAAGCCCCTTGTGGCCATTGCGGCGCGTCAGGGTGGGGACATTGATGCTGTGTTCAACGCGCATCCTCGTCTCTCCATTTGGTATGTACCCACTAAGCTCCGTCAACTTTGTCACGCCGAGAAGAACGCCGCCGCCGCCGCTGGAGCTTCCAGTTCTGTCTCTGTCGGAAGCGCTCACTTCCCCATCTGA 384 0.5469 MHLMDPNMTSYVREEGRSELHKQVQDATLQALLCVALFRRGGSNELRRRYKERGENVGAWRQACCKPLVAIAARQGGDIDAVFNAHPRLSIWYVPTKLRQLCHAEKNAAAAAGASSSVSVGSAHFPI 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0625 127 PANTHER PROTEIN LEAFY 30 117 IPR002910 GO:0003677|GO:0006355
Lele39g0625 127 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 38 110 IPR035209 GO:0003677
Lele39g0625 127 Gene3D Protein LEAFY 6 116 IPR038276 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0625 Lele-ChrLele39 6029912 6030390 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0625 43 107 Orphan Transcription Factor Family AT5G61850 83.077 1.01e-33 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LFY Lele39g0625 C_LFY_FLO 8.5e-36 CL0123