Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0618 ATGGGGCTTGGGGGAGAAATTGAGAAAAGAGAGAGCGCGACTGGGAGAAGAAAGCGAAATAGAGGCAGAACTGAAGACTCGATATTCAATTCTGGTGAAACCAGAACAGGTAATGGCTTCAGGTCAGTGGAAGGGCATGATTTTATAATATCTAGCATCGATAATGATGATAAGCAATGTCCAACTATGGTGGAACGAACGACCAAAACTTGGATTTATGGTGGAATGTGCTCTAACAAAACAAGGTCAGCATTTTGTAAAGGTCGTGACCTCTGGAGGCCCCTCGACCAAAAACAACTTGATCTGAAGATTCGTATAAATTGGAACCCTAAGATTGTAGCTGAGCTTGCTGCTTTGCTGGATAAACAGGAAAAATATTCAGCCTGGGAAACTCTAATCTCGGAAGCCACTTCCAAATTAGAGTCTTGCTCTCGAGATGTGGCTCTTTTCTATTGTAAATTGTTAGAGTAGGATTTAGTCAGTGATATGAGAATCAAAGCGCTTGAACCTTCAGCATTTGAATTCAAGTCTATTATGTATGGTTGTGGAAGATTAGGGTTATATGAAGATTTTGAGAGAATTCTGGCTCAAATGGAAAAGGAAGGGATTGTTATTGATACAATTTGTTCAAATATGGTTCTTTCAGCATATGGAATGCATGTGATAATGAGAAAATTGGTTGACTTAAATGGCTTCCTATTGTCAATTAAAGAGTTGAATGCTAGTTTGGAAGGAGATGAAGAAGCCATGGTGGTTGGGGAGCTAACCAGAGGCTCCGAGTATGAGTGTGAATGGCGTCCTGGAGGGGGAGGGTGCGGGGATGATGGGGACTGCTTAGGTGATGTTGACGATGGTGGAGAAGGTGGGCCGGGCGGTTGCAACGCCAGAATCCTCCTAGAGAAAGAATGTTACTCCAACCAGTCGGCAACATGCTATGAAGTAATTGATGCCATCAAATTCAACGTCGAAGCTGCCTGCAATTTCACTTTGTCTTGTGCGGATATATTGGCACTGGCAGCACTAGAGGATGTTACCCAGGCAACTGTGAGGGCTTTTACGTTTCCATCGTCCATCGCTCATCTCTTAAGGTCGATTCCTCTACGACATGGAGCTTTGGGTAATTTGATCAAAGATTTAACTGGTATCGTGGAGAGGCAGTTCGTAGGTTCATCACCGTTGGCTGAAAATTCTGCAAGGACCTGGACATTCATAGCAAGTAGAATCATCTATAGCTGTACAAGCGACGTGATATCAGGCTCCTTGGCTTGTACAGTATTAATATCATTCCTCATATCGCATCATGAAATTCCAAAGTATGTTTTTGCGATCTGGGCAATATGGGTTGTTTCATATGTGATGAACAACGGGGCAGCAGTTCCTGTAAACAACAATGGTTCTACTACAGACAGTGACTACTCCACGAGTGGCTAA 1431 0.4312 MGLGGEIEKRESATGRRKRNRGRTEDSIFNSGETRTGNGFRSVEGHDFIISSIDNDDKQCPTMVERTTKTWIYGGMCSNKTRSAFCKGRDLWRPLDQKQLDLKIRINWNPKIVAELAALLDKQEKYSAWETLISEATSKLESCSRDVALFYCKLLEXDLVSDMRIKALEPSAFEFKSIMYGCGRLGLYEDFERILAQMEKEGIVIDTICSNMVLSAYGMHVIMRKLVDLNGFLLSIKELNASLEGDEEAMVVGELTRGSEYECEWRPGGGGCGDDGDCLGDVDDGGEGGPGGCNARILLEKECYSNQSATCYEVIDAIKFNVEAACNFTLSCADILALAALEDVTQATVRAFTFPSSIAHLLRSIPLRHGALGNLIKDLTGIVERQFVGSSPLAENSARTWTFIASRIIYSCTSDVISGSLACTVLISFLISHHEIPKYVFAIWAIWVVSYVMNNGAAVPVNNNGSTTDSDYSTSG 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0618 476 TIGRFAM PPR: pentatricopeptide repeat domain 177 207 IPR002885 -
Lele39g0618 476 MobiDBLite consensus disorder prediction 1 40 - -
Lele39g0618 476 Pfam Peroxidase 291 351 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele39g0618 476 Gene3D Tetratricopeptide repeat domain 128 248 IPR011990 GO:0005515
Lele39g0618 476 Gene3D - 292 350 - -
Lele39g0618 476 SUPERFAMILY Heme-dependent peroxidases 287 341 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele39g0618 476 MobiDBLite consensus disorder prediction 9 28 - -
Lele39g0618 476 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 171 205 IPR002885 -
Lele39g0618 476 ProSiteProfiles Plant heme peroxidase family profile. 292 425 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0618 Lele-ChrLele39 5926373 5938649 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0618 292 366 Peroxidase AT4G26010 39.759 5.51e-08 52.8