Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0575 ATGTTTGGGCGTGCACCATCAAGGAGTGATAACACCAAATATTATGAAATTCTTGGTGTTTCAAAAAGTGCCAGTCAAGATGAACTGAAGAAAGCCTATAAAAAGGCTGCAATCAAGAATCATCCAGATAAAGGTGGAGATCCTGAAAAGTTCAAGGAGTTAGCTCAAGCATATGAAGTGCTCAGTGATCCTGAAAAGAGAGAAGTGTATGACCGGTATGGTGAAGATGCCCTTAAAGATGGAATGGGAGGAGGAGGAGGTGGCCCATTTCATAATCCATTCGATATATTTGAGTCATTCTTTGGCGGGTCGGCCTTTGGTGGCGGCATTAATTCACGTGGAAGAAGGAAGAAACATGGTGAAGATGTGGTGCATAGTTTGAAGGTTTTTTTGGAGGATCTATATAATGGGACCACAAAGAAAATATCTCTTTCTAGAAATGTGCTTTGCCCAAAATGTAAAGGGAAAGGTTCAAAAAGTGGAAATACAGGGAGTTGCTATGGATGTCAAGGCACAGGTATGAAGATTACAACAAGGCAGATCGGACTGGGTATGATTCAACAAATGCAACATGTCTGTCCTGACTGCAGAGGAAGTGGCGAGGTCATTAGTGAGAGAGATAAATGCCCTCAGTGCAAGGGGAACAAAATCACTCAGGAAAAGAAGGTGCTAGAGGTGCATGTTGAGAAAGGGATGCAACAGGGTCAGAAGATTGTGTTTGAAGGACAGGCTGATGAAGCTCCCGACACAATTGCAGGAGACATTGTTTTCATCCTACAAGTAAAGGAGCACCCCATGTTCAAGAGGAAGTATGACGACCTCTATGTTGAGCATAACCTGAGTTTAACTGAGGCACTTTGTGGTTTTCAATTTGTCATTACACATATGGATGGGAGGCAACTCTTGATCAAATCAAACCCCGGGGAAGTCATCAAGCCAGGTCAATATAAAGCGATAAATGATGAGGGAATGCCACATCATAACAGGCCTTTCATGAGGGGCCGTCTATACATCCAATTTAATGTCGATTTCCCAGACTCAGGTTTCCTCAACCCTGACCAATGCCGGTTATTTGAAACCTTGTTACCTCGGAAGCCAAGCAAGCAGTTGACTGATATGGAGCTGGATGATTGTGAGGAAACCACTATGCACGATGTCAACATTGAGGAGGAGATGAAGCGAAAGAAGCAACAGCAGTATCAAGAGGCATACGACGAAGATGATGATGATGAGCCATCAATGCCTCGAATGCAGTGTGCTCAGCATGGTGCTATGGAGATTCCATATCCCTAG 1293 0.4377 MFGRAPSRSDNTKYYEILGVSKSASQDELKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREVYDRYGEDALKDGMGGGGGGPFHNPFDIFESFFGGSAFGGGINSRGRRKKHGEDVVHSLKVFLEDLYNGTTKKISLSRNVLCPKCKGKGSKSGNTGSCYGCQGTGMKITTRQIGLGMIQQMQHVCPDCRGSGEVISERDKCPQCKGNKITQEKKVLEVHVEKGMQQGQKIVFEGQADEAPDTIAGDIVFILQVKEHPMFKRKYDDLYVEHNLSLTEALCGFQFVITHMDGRQLLIKSNPGEVIKPGQYKAINDEGMPHHNRPFMRGRLYIQFNVDFPDSGFLNPDQCRLFETLLPRKPSKQLTDMELDDCEETTMHDVNIEEEMKRKKQQQYQEAYDEDDDDEPSMPRMQCAQHGAMEIPYP 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0575 430 Pfam DnaJ central domain 150 216 IPR001305 GO:0031072|GO:0051082
Lele39g0575 430 Hamap Chaperone protein DnaJ [dnaJ]. 10 395 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Lele39g0575 430 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 11 403 IPR044713 GO:0006457|GO:0030544
Lele39g0575 430 CDD DnaJ 14 63 IPR001623 -
Lele39g0575 430 Pfam DnaJ C terminal domain 124 345 IPR002939 -
Lele39g0575 430 ProSiteProfiles dnaJ domain profile. 13 74 IPR001623 -
Lele39g0575 430 FunFam DnaJ subfamily A member 2 264 346 - -
Lele39g0575 430 FunFam dnaJ protein homolog 10 111 - -
Lele39g0575 430 SUPERFAMILY Chaperone J-domain 8 108 IPR036869 -
Lele39g0575 430 Gene3D DnaJ domain 10 112 IPR036869 -
Lele39g0575 430 ProSitePatterns Nt-dnaJ domain signature. 51 70 IPR018253 -
Lele39g0575 430 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 147 219 IPR036410 -
Lele39g0575 430 Gene3D - 150 216 - -
Lele39g0575 430 SUPERFAMILY HSP40/DnaJ peptide-binding domain 266 347 IPR008971 GO:0006457|GO:0051082
Lele39g0575 430 Pfam DnaJ domain 13 71 IPR001623 -
Lele39g0575 430 MobiDBLite consensus disorder prediction 389 430 - -
Lele39g0575 430 ProSiteProfiles Zinc finger CR-type profile. 137 221 IPR001305 GO:0031072|GO:0051082
Lele39g0575 430 Gene3D - 265 346 - -
Lele39g0575 430 SUPERFAMILY HSP40/DnaJ peptide-binding domain 121 265 IPR008971 GO:0006457|GO:0051082
Lele39g0575 430 PRINTS DnaJ domain signature 66 85 IPR001623 -
Lele39g0575 430 PRINTS DnaJ domain signature 15 33 IPR001623 -
Lele39g0575 430 PRINTS DnaJ domain signature 46 66 IPR001623 -
Lele39g0575 430 CDD DnaJ_zf 150 216 IPR001305 GO:0031072|GO:0051082
Lele39g0575 430 Gene3D - 113 264 - -
Lele39g0575 430 SMART dnaj_3 12 66 IPR001623 -
Lele39g0575 430 Coils Coil 386 406 - -
Lele39g0575 430 CDD DnaJ_C 121 347 - -
Lele39g0575 430 FunFam DnaJ subfamily A member 2 150 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0575 Lele-ChrLele39 5324960 5328013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0575 5 73 C2H2 Transcription Factor Family AT1G74250 43.590 7.03e-12 65.5