Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0566 ATGCCTCCAAGGAAGAAACCCAGCTCTACTTCCAAGAAATCGAATCAGAGCAGCCAGGCTCAACCTTCCAAGTTCGGCATTCAACATTTTTTTGAGCGCCACACCCAGAATGCTCTTCTGGCCTCTCAGAAGCAGCCCAAAAATGAGGCATCTGCAAACCGTCCCGTTTCTACTCCCCAATATTCCAAATCTGTTGCACCTCCTAACTCTCATATTCCATCTGTTGATGAGTCCCAAGCTGTTGCCCCAAACAATTTAGATTCCGTTCTTCCCAGAGCTGAATATAATTTGAACTCAGACTTGGCTGGACCACAAATGGGGAATTCAGAATTGCAAAAGCGGAAAGACGTCCCGCCTGTAAGAGCAAATGAATCGAATAACGTGTCGCAGAATACTCCTTCAGAGAATTTGTTAATACCAGGGTTTGATGCAGTGGATAATCTCCCCGAGGCGTCTCCAGAAATTTCTAAAATTGTGCCCCATAAGCGCTCTAAGTTCTCGCCTGGGATGAATCAACTTGTTGCCCGTTGGGATTTCCTCAGAGAATCAGGCAAGTTTTTGAGGAGCGCTCGCTTTGATTTTGATGTTTTATCGTTTAGTATGGTTATATATTACCAACGCTTGGTGCAGACGTCTCTGACTAAAGGTGGCAAATTTGGAAAGTTACTTACTTCACCAGCTACAAAGGCTGCTGAGAGGTCAACAGTGTCTAAGAATGAAAAAGGATTGAAATGCATAAACCCAGACCAAGACATGGTTTTTAATTTCAGTTCAACTGCTGTGAATGATTCTGGAGTAACTGGACCGAGCCCCTTCAGAACTCCACCATCTTTATCCTATTGCTCTGACAAGGCATTGCTTGAACTGTTAGATCAAGTTGAAGATGCCATATGTGTTGAAGATGCTACAATTTGTGATAAAAGTGCAAATTGCATTAAGTCTCAAGATGGAATTGCTGATAATCTGCCCATCAGAGTTGACTGTGCAGCAGAAAGTACTTTAATTCACACGCCTAAAGAGGCCATTGGTGGGTCCAATTCTAATTATTTGGTGTTGGAGGTGTCTGAAAAAGATACGCTTGCTAATTCATCTGCTTTGCAAGGCCCATGCAAGGTGCTTCGTTTAATAAATGAACAAACTGGAGAAGAGAAGGCTGTAAACTTGTTGGAAGAGTGTGTTGTTGCACCTGGAGATACTGTGAATATAATTGGTCAATTTGATGATCATGGGCATTGTGATGTAGGTCACGATAATAATTTTTTGATTGTACACCCAGATATTCTGGTGTCTGGATCTCGGGTAGCTGCTAGTTTTACTTGTCCAAGGAGAACTGTCTTAGATGAGAGGTTAAAATATAATGAGTACTCAATTGCCGCATTAACTGGAACCTTACTTCACCAAATTTTTCAGGCTGGACTTATCAAGGATAGTCCTACAATAAACTTCTTAGAGGAATATGCGGGATTGGTACTCCAGAGAAACATTGAAAGCTTGTATGCATGTGGAGTAAATGAAAATGATATACACAAAACCTTGATAGATGCCATCCCACGAATGTTAAATTGGATCAAACTGTTCAAGAATTCAGAGGAAAAGAAATATGCTTATGTTGATTTTGGATGTGATGATGGGATAAAGAAAGTCGAAATATCTGAGGCAAGCACCAAACTTGATCACTTTGTGCTTAACCAATTGATCAATTGCATATCACAATGGATCCAGTAA 1725 0.4116 MPPRKKPSSTSKKSNQSSQAQPSKFGIQHFFERHTQNALLASQKQPKNEASANRPVSTPQYSKSVAPPNSHIPSVDESQAVAPNNLDSVLPRAEYNLNSDLAGPQMGNSELQKRKDVPPVRANESNNVSQNTPSENLLIPGFDAVDNLPEASPEISKIVPHKRSKFSPGMNQLVARWDFLRESGKFLRSARFDFDVLSFSMVIYYQRLVQTSLTKGGKFGKLLTSPATKAAERSTVSKNEKGLKCINPDQDMVFNFSSTAVNDSGVTGPSPFRTPPSLSYCSDKALLELLDQVEDAICVEDATICDKSANCIKSQDGIADNLPIRVDCAAESTLIHTPKEAIGGSNSNYLVLEVSEKDTLANSSALQGPCKVLRLINEQTGEEKAVNLLEECVVAPGDTVNIIGQFDDHGHCDVGHDNNFLIVHPDILVSGSRVAASFTCPRRTVLDERLKYNEYSIAALTGTLLHQIFQAGLIKDSPTINFLEEYAGLVLQRNIESLYACGVNENDIHKTLIDAIPRMLNWIKLFKNSEEKKYAYVDFGCDDGIKKVEISEASTKLDHFVLNQLINCISQWIQ 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0566 574 MobiDBLite consensus disorder prediction 1 77 - -
Lele39g0566 574 MobiDBLite consensus disorder prediction 98 136 - -
Lele39g0566 574 MobiDBLite consensus disorder prediction 7 25 - -
Lele39g0566 574 MobiDBLite consensus disorder prediction 35 77 - -
Lele39g0566 574 MobiDBLite consensus disorder prediction 122 136 - -
Lele39g0566 574 Pfam DNA replication factor Dna2 391 537 IPR014808 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0566 Lele-ChrLele39 5147710 5152878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0566 1 553 Core DNA Replication Machinery Family AT1G08840 38.861 1.05e-99 323