Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0565 ATGTTGAAAAATTTTAGTTAATGTCACTCTCATAATTTGTACTTAGTGAGGTTGCGAACGGAAGAACCACAGCTGGTTTCTAGAGGAGCAGAAGCTCTCCATCTCTCTCCTGGATCCTCAATTTCTGTTGCTTATCATCCTCTTTTTGGCCCTCATGATGATCTCATCTTCCTAGACCTTGACGAGAAACTTCTCTCAGAAGTTCTGCATGAAAGGGCTGTTCTAAGAGGACAGCCAGATGAAGATGCAGTACTTTGCACTCCGTCCAAAACTTATTCTATCAAGTTTGTTGGAACTTCCAATTCTGTATTCCTTGTACCACCAAATCAATCAGAATATCATCAACCTCGACAAAAGAGTGATAGTCATAATTATCCAGACCAAAAAGTTGTATCTGTGATCAAAGTTGTACCTGGTAGCATGGAGCTTGTTGAGGTTGCTCCTAGACTTGATAAACTCAAGTCACTTCTTTCAGTGAACCCTTACAGTTGTGAAGAGTTAGAAGCAGTTTCTGCTGTTGAGATTAATGGGCATTGGAGATTAGTGGATGAGAGTTACATGCTCACCACTCTAAGAATGCTTTTGCACAATTCAGTGTTGAATGACTGGTTGCTTAATGCTTTTAATGAAGATGGAGTTGTGAATATTCTGGAATCTGATGGATTCCCACGGGTACTTGCAAAACACTCTTTGCATTTTACAAGGGAAATCCTGAGAGGAGGAAAGAAAAAGTTGGAGAATTTCATGGATGAATGGAGGCAGAAGATTCCAGATGGCATGCAACCCACTTTAGATCTTTTGGAAGGAGAGGTTTTGACTGATAGGGTTGGTGTTGAGACGTGGATTCATGCCTTATATCAGAGAACGGAAAAGTGGGATTGGAAGGATCTACAGCCTTATATCAGGGATCTAAACGTGCCAGGTCTTTCTTCTGAAGCTTTGCTTCTCAAATACACCCGAAGAACACAACCAACTCCCGATGCAGAACCAGTTTTCAGAGCAAGATAA 1008 0.4117 MLKNFSXCHSHNLYLVRLRTEEPQLVSRGAEALHLSPGSSISVAYHPLFGPHDDLIFLDLDEKLLSEVLHERAVLRGQPDEDAVLCTPSKTYSIKFVGTSNSVFLVPPNQSEYHQPRQKSDSHNYPDQKVVSVIKVVPGSMELVEVAPRLDKLKSLLSVNPYSCEELEAVSAVEINGHWRLVDESYMLTTLRMLLHNSVLNDWLLNAFNEDGVVNILESDGFPRVLAKHSLHFTREILRGGKKKLENFMDEWRQKIPDGMQPTLDLLEGEVLTDRVGVETWIHALYQRTEKWDWKDLQPYIRDLNVPGLSSEALLLKYTRRTQPTPDAEPVFRAR 335
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0565 335 PANTHER SISTER CHROMATID COHESION PROTEIN DCC1-RELATED 230 335 IPR019128 GO:0007064|GO:0031390
Lele39g0565 335 Pfam Sister chromatid cohesion protein Dcc1 232 301 IPR019128 GO:0007064|GO:0031390
Lele39g0565 335 Pfam Sister chromatid cohesion protein Dcc1 57 169 IPR019128 GO:0007064|GO:0031390
Lele39g0565 335 Pfam Sister chromatid cohesion protein Dcc1 166 233 IPR019128 GO:0007064|GO:0031390
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele39g0565 Lele-ChrLele39 5142782 5144930 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0565 29 335 C3H Transcription Factor Family AT2G44580 45.619 1.19e-111 328