Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0564 ATGAGATTGGAGAAATGCTGGTTCTGCTCTTCAACCATATACCCTGGACATGGAATCCAGTTTGTTCGTAATGATGCAAAGATTTTTCGATTTTGTAGATCTAAGTGTCACAAGAACTTTAAAATGAAGAGGAATCCTCGAAAAGTAAAATGGACCAAGGCATATCGGCGTTTGCATGGGAAGGATATGACACAGGATTCAACCTTCGAGTTTGAGAGAAAGCGAAACAGGCCTGAAAGATATGATCGGAACCTTGCGGAAGATGTGCTCAAGGCTATTCCAAAGATTGATAAGATCAGAGTTAGCAGGGAGGAGAAACACCACAAGAATAGAATGAAAGGCAATAAGGCTAAGCTGCTCAAGGAGGCTGCAAAGGAATTGGAGCAGGGCATCAATTTGGTCAAAGCTCCATCTGTGCTTCAGCAGGATCCATCTCTCACTTTACCAAAGATCAAAGTTGAAGTTTCCCAACAGCAAGCCGATGAGAATCGTCTGATGGAAGAGTGA 507 0.428 MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHGKDMTQDSTFEFERKRNRPERYDRNLAEDVLKAIPKIDKIRVSREEKHHKNRMKGNKAKLLKEAAKELEQGINLVKAPSVLQQDPSLTLPKIKVEVSQQQADENRLMEE 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0564 168 Gene3D Ribosomal protein L24e 1 68 IPR038630 -
Lele39g0564 168 FunFam probable ribosome biogenesis protein RLP24 1 67 - -
Lele39g0564 168 SMART 4TRASH 6 44 IPR011017 -
Lele39g0564 168 ProSitePatterns Ribosomal protein L24e signature. 8 25 IPR023442 -
Lele39g0564 168 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 4 56 - -
Lele39g0564 168 Coils Coil 109 129 - -
Lele39g0564 168 PANTHER 60S RIBOSOMAL PROTEIN L24 1 164 IPR000988 -
Lele39g0564 168 Pfam Ribosomal protein L24e 1 65 IPR000988 -
Lele39g0564 168 CDD Ribosomal_L24e_L24 1 54 IPR000988 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0564 Lele-ChrLele39 5128730 5130350 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0564 1 168 Cytoplasmic Ribosomal Protein Gene Family AT2G44860 69.048 1.00e-82 239