Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0555 ATGGCCGGCCTTGACTTAGGTTCAGCATCTCACTTTGTTCATCAGCTTCAACGCCCTGATCTTCACTCCAATAATCATGAAGATGACAATCGAGAGGACCACGACGACGATGACCCTCAAGGGCTTGAGCTAGTTACTCCGAACTCGGGAGGATCTGGCGGTGGCGATGGTAGCGGTCGCCGGCCAAGGGGTCGGCCTCCTGGCTCGAAGAACAAGCCGAAGCCGCCGGTGATCATCACTAGAGAAAGTGCAAACACGCTTAGGGCTCATATCCTTGAAGTTAGCAGCGGCTCCGATGTGTTTGACTCGGTGGCGACCTATGCGAGGAAGCGGCAGCGAGGGATCTGCGTCCTAAGCGGCAGTGGCACCGTCACCAACGTAACGTTACGGCAGCCAACGGCTGCCGGTGCCGTTGTGACCCTTCACGGGAGGTTTGAGATATTGTCCTTGGCTGGATCTTTTTTGCCCCCTCCAGCTCCGCCGGGCGCCACTAGCCTGACGATATTTCTCGCCGGAGGGCAAGGTCAAGTTGTGGGAGGAAATGTTGTTGGTGCCTTGATAGCTGCTGGGCCTGTTATTGTTATTGCTTCCTCATTTTCAAACGTAGCATATGAGAGATTGCCCTTAGATGAAGAAGAACCACTACAGATGCAACAAGGTCAATCTTCCGGCAGTGGCGGTGGAGGCAGCGGCAACTCGTTCCCAGACCCATCTTCAGGGCTGCCGTTCTTTAATCTGCCGTTAAACATGCCGCAGTTACCTGTTGACGGTTGGGATGGAAACTCAGGTGGGGGTGTGTCTGGTGGTGATGATGATGATTTATGA 825 0.5442 MAGLDLGSASHFVHQLQRPDLHSNNHEDDNREDHDDDDPQGLELVTPNSGGSGGGDGSGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVSSGSDVFDSVATYARKRQRGICVLSGSGTVTNVTLRQPTAAGAVVTLHGRFEILSLAGSFLPPPAPPGATSLTIFLAGGQGQVVGGNVVGALIAAGPVIVIASSFSNVAYERLPLDEEEPLQMQQGQSSGSGGGGSGNSFPDPSSGLPFFNLPLNMPQLPVDGWDGNSGGGVSGGDDDDL 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0555 274 ProSiteProfiles PPC domain profile profile. 84 221 IPR005175 -
Lele39g0555 274 SUPERFAMILY AF0104/ALDC/Ptd012-like 84 215 - -
Lele39g0555 274 MobiDBLite consensus disorder prediction 1 78 - -
Lele39g0555 274 CDD DUF296 88 171 IPR005175 -
Lele39g0555 274 MobiDBLite consensus disorder prediction 215 239 - -
Lele39g0555 274 Pfam Plants and Prokaryotes Conserved (PCC) domain 88 201 IPR005175 -
Lele39g0555 274 MobiDBLite consensus disorder prediction 213 274 - -
Lele39g0555 274 Gene3D - 87 221 - -
Lele39g0555 274 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 24 226 IPR014476 GO:0003680
Lele39g0555 274 FunFam AT-hook motif nuclear-localized protein 87 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0555 Lele-ChrLele39 4932386 4933362 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0555 1 264 AT-hook Motif Nuclear Localized (AHL) Family AT2G35270 62.284 1.16e-97 286