Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0530 ATGTATTGCTTTCACTACTTCACCAGACACAGGAGGCGAAGATCATCAGAATCTGAGCTTAAAGAAGAATTTAAGTCCCAAAACTCTGAGGTCAATAGAATCATCCAATCTTCGTCGGCATCAACCTCACAGCGTGGGATTCCAGAATTGTATGAAGAGAAGGCTCACAATTTGCGGGTTTTCTCCTTCGCTGAACTCCAGCGAGCGACAAATAATTTCAGTAGGCTTTTGAAGATTGGTGAAGGTGGGTTTGGGAGTGTATATAAAGGTTCAATCCAGGCCACTGATAATAAGGAGTTTGTTTCGGTTGCCATCAAAAGGCTTGACCCTGATGGATTCCAGGGTCATAAGCAATGGTTCGCTGAAGTTCAGTTTCTGGGTGTTGTGGAGCACCCGAATCTTGTGAAACTCATCGGATATTGCGCTGTGGATACTGAGAGAGGGATCCAGAGACTTCTTGTATATGAATACATGCCGAATAAAAGCTTGGAATATCATCTTTTTAACAAGGCATATGATCCTCTTCCTTGGAAAACAAGACTTGAAATAGCACTTGGAGCAGCTCAAGGGTTAGCTTATCTCCACGAAGAATTAGAAGTTCAGGTGATATATAGAGATTTTAAAACCTCAAATGTATTACTGGACGAAAATTTTAGGCCAAAACTTTCTGATTTTGGACTTGCTAGGGAGGGTCCAATAGCTGGGCACACTCATGTTTCAACTGCAGTGATGGGAACATATGGCTATGCTGCTCCAGATTACATTGAGACAGGCCATCTCACTGCAAAGAGTGATGTATGGAGTTTTGGGGTGGTTCTCTATGAAATTCTTACGGGGAGGCGATCGCTGGATCGAAACCTGCCAAAGATGGAGCAGAAACTCTTGGAGTGGGTGAAACAGCACCCTACTAACAGAAGAAGGTTCAGCTTGATAATTGATCCAAGACTTGAAGGCCAGTATTCCATAAATGGAGCACGAAATATCGCCAAGCTCGCAGATGATTGTCTGAGCAAAACTGCGAAAGAGAGACCGAGGATAAGTCAGGTGGTGGAGAGGTTGAAGCAAATAATCATGAATTCAGATGAAGATAATAATAATCCTCCTGATGAGAAAAATATTAATCTGTTTGAAAATGATGATTTGCTAGATGAAGAAGAAAAGCCAAATCAACCAGACCCTTCAACGTTGTGGCATAGGAGGATGGCCCATCTTGCAAAACTTGGTGAGCATGCAGAGACTGCTATAGGACGAAAATTTATGAACCTCCAAAAGACCAAATCTGGTTTTTAG 1290 0.424 MYCFHYFTRHRRRRSSESELKEEFKSQNSEVNRIIQSSSASTSQRGIPELYEEKAHNLRVFSFAELQRATNNFSRLLKIGEGGFGSVYKGSIQATDNKEFVSVAIKRLDPDGFQGHKQWFAEVQFLGVVEHPNLVKLIGYCAVDTERGIQRLLVYEYMPNKSLEYHLFNKAYDPLPWKTRLEIALGAAQGLAYLHEELEVQVIYRDFKTSNVLLDENFRPKLSDFGLAREGPIAGHTHVSTAVMGTYGYAAPDYIETGHLTAKSDVWSFGVVLYEILTGRRSLDRNLPKMEQKLLEWVKQHPTNRRRFSLIIDPRLEGQYSINGARNIAKLADDCLSKTAKERPRISQVVERLKQIIMNSDEDNNNPPDEKNINLFENDDLLDEEEKPNQPDPSTLWHRRMAHLAKLGEHAETAIGRKFMNLQKTKSGF 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0530 429 CDD STKc_IRAK 79 356 - -
Lele39g0530 429 Pfam Protein tyrosine and serine/threonine kinase 78 353 IPR001245 GO:0004672|GO:0006468
Lele39g0530 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Lele39g0530 429 FunFam PTI1-like tyrosine-protein kinase 3 158 367 - -
Lele39g0530 429 Gene3D Phosphorylase Kinase; domain 1 46 157 - -
Lele39g0530 429 ProSiteProfiles Protein kinase domain profile. 73 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0530 429 FunFam Serine/threonine-protein kinase BIK1 38 157 - -
Lele39g0530 429 ProSitePatterns Protein kinases ATP-binding region signature. 79 106 IPR017441 GO:0005524
Lele39g0530 429 SUPERFAMILY Protein kinase-like (PK-like) 55 353 IPR011009 -
Lele39g0530 429 Gene3D Transferase(Phosphotransferase) domain 1 158 381 - -
Lele39g0530 429 PANTHER OS01G0588500 PROTEIN-RELATED 31 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0530 Lele-ChrLele39 4593668 4596590 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0530 3 373 Glycoside Hydrolase AT3G07070 42.188 5.06e-93 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele39g0530 PK_Tyr_Ser-Thr 2.4e-45 CL0016