Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0528 ATGAAAGCCGAGTCTAATAGTGCTTCTACAGGCCGGACGATACCAAATGGCGCCCATTTACAACAATCACCTGTAATTGAGCGTTGTTATATTATGCTTGCGAATATTCTTTATGAACTTCATTCATGCGGTGTAGCAGGAGCGTCTGATGCGCCAGTCATAAATGCAGCTGCCAAGTCATCTGAACCCTCGTCTGTGCAGAAGAGCACCAGAGGTGTTCCGAAAGCTCCAACTCCTCGACCTACCACCATGAATTCTGATACTGCAGCTCCTACAACCCCTACCAAGGGTATAGTATTTCTGCATGCTTTGTGCTTGATTCCTGCCCACACAAGCTCAGATACTCCAAATTTGAACGAGCAGAAAAGAGATCAGGCACATCATGATTCCTTTAAACCTGTGCCTTCAGTGCCTACACCTCCAAAGCAGCTACCACCAAGGAATGATGGCGGAGTTATTGACCAATCTAATGCTGGGGAGGCTCATTCAGTAAGCAAGGTGAAAAAGGAGGAGCAGGCATCAGTTTTGCCCCCATCAAGCCAGGTGCAAAAGCCATCTGTTCCCATGACTGGGATTTCAATGGCAATGCCATATCATCACCAATCACAGGCACCTGTACAGTTTGGTGGTCCTAACCCACAGATTCAATCTCAGGGAATGCCAGCAGTATCGCTTCTGATGCCTATGCCAAAGCCTTTGCCAATGGGAAATGTTCCACAAGTACAACAACAGGTTTTTGTTCCAAGCCTTCAACCTCTTCCTAATCATCCTCAGGGAATTATGCATCAAGGCCAAAACTTAAGTTTCGGTTCTCAAATGAGTCCTCAGTTGCCCCATCAGTTGGGTAACATGGGTATTAACACGAGCCCACAATATTCCCAGCAGCAAGGAGGAAAATTTGCTGGTCCTCACAAAACTACCACTGTTGAGTATACTCATCGTGAGAAACATGAAGAGCTGAGGCTTGACTTTGACAAAAAGGCAGATTCACATTCAGATGGCGTGACCTCAGGTGCTAGGTCTTATCCTAATGTTCCTTCTCAGGCTCAACCTGTTCAATCATTTGCTGCTTCTCATCCCCTCAACTATTTTCCATCTAGCACTTACAGTAGCGGCTGTCTTTTTTTCCGGCCGAGTTCTGGTCATTTATCTAGCAGCCATATGACCCCTGGTGGTGATAGGTGGCAACGAGCAACTAACTTCCAGCAGAGGGGTTTAATTCCTTCTCCTCAAACCCCACTGCAGATGATGCATAAAGCTGAGAAGAAGTATGAGGTGGCTAAGTTGAGAGGTGTGGAACGAGCGAAGCAGAGGCAATTGAAAGCCATTTTGAAGAAGTTAACCCCTCAGAATTTTGAGAAACTTTTTGAGCAGGTAAAATCAGTTAATATTGACAACACTGTCACTCTTACTGGTGCAGTCTCTCAAATATTTGAGAAAGCTCTAGGGGAGCCTACCTTCTGTGAAATGTATGCCGATTTGTGCTTACATCTAGCTGCTGAGTTGCCTGATTTCAGTGAAGACAATAAAAAGATAACTTTTAAGAGATTATTGTTGAACAAGTGCCAAGAGGAATTTGAGAGGGGTGAAGGAGAGAAAGAAGAAGCTAATAAAGATGATGAGGGTGAAGTCAAGCAGACAGATGAAGAGAGGGAAGAGAAACGGGTTAAGGTAAGACGGCGCATGTTAGGTAATATAAGATTGATTGGAGAGTTATATAAGAAAAAAATGTTGACAGAGAGGATAATGCATGAATGTATCAAGAAGTTACTGGGATCTTATCAGGACCCTGATGAGGAAGATATTGAAGCTTTATGCAAGCTGATGAGTACTATTGGGGAGATGATTGATCATCCCAAAGTCAAGGAACACATGGATGCATATTTTGAAAGGATGAAGTTGTTATCAAACAACATGAATTTATCTTCTCGAGTTAGATTCATGTTGAAGGACGCTATTGATTTGAGAAAGAATAATTGGCAACTGAAGCGGAAAGTTGAAGGTCCAAAGAAGATTGAGCAGGTGCATAGAGATGCTGCCCAAGAGAGGCAGGCCCAAACTGGCCGGCTGGGTCGTGGTCCAGGCAATTCTGCATCATCAAGAAGGATGCCTATGGATTTTAGTCTAAGAGGGTCATCTATGTTGTCTCCTCCTAACACCCCAATGGGGCTGCGTGGGCTATCTGCACAAGTTCGCAGTGGTGGTTCTCAGGATGTTCGTCAAGATGATAGACTATCATATGAGGGTAGAAATTTGTCTATTCCTTTGCCTCAGAGACCTTTAGGGGATGACTCTATAACCTTGGGACCACAAGGTGGTCTTGCAAGAGGAATGTCCTTTAGAGGGCCAGCTGTAATTCCAAGTTCTCCTGTTCCTGATGTGCTCCCAGGTGCAGATTCTCGAAGAGTGGCATCTGGCCCTAATGGTTATAGTAATTCATCACAGCGTACTTTGTACAGCAGTAGAGATCAAATGCCAAGATATTCTACGGATAGATTTGCTGGTCCGACTGCTCATGACCAATCAGCTGTTCAGGATCGTAATATTAATTATGGTAATAGGGAGTTGAGAAATGCCGGCTGGGTTCTTGAGAGACCTGTTGCAACTTTACCTCCTGGAGTGCAAGGATGTGGAGTCTCCGAGAATGCTTTGTCAGAGACAGTTTGGCCGGAAGGACGACTGCAGGGCATGTCCATGGCTGCAATTAAAGAATACTACAGTTTGTTGGTTGGGACTTGGGACTGCTTTACTTTGATTTTTCTGAAGGATGCAGAAGTTAATGCAGCTTACAGAAAGGACACGGAGAGAGATCTTTTGGCCAAATTACTAGTGAGCCTTACGCAAGATGGCACCTTGAGTCAGGCTCAGCTAATCCATGGATTCGAATCTGTTCTAAGTGGTCTGGAAGATGCAGTTAATGACGCTCCTAGAGCCCCAGAATTTCTAGGCCAAATCTTTGCTAGAGTTGTTATGAAAAATGTTGTCTTATTGAAAGAGATCGGCCAACTATTACATGAAGGCGGAGAGGAGCCAGGCCAACTCTTGGAAATCGGACTGGCAGCTGATGTTCTTGGAAGCATATTGGAAGCAATAAAAATGTACAAGGGGGATGCTGTTCTGAGTGAGATACGCTCAAACTCTAACTTGAGGCTGGAGACTTTCCGGCCACCCCATCCGATTATATCAAGAAAGTTAGAAAATTTTATTTAG 3210 0.4452 MKAESNSASTGRTIPNGAHLQQSPVIERCYIMLANILYELHSCGVAGASDAPVINAAAKSSEPSSVQKSTRGVPKAPTPRPTTMNSDTAAPTTPTKGIVFLHALCLIPAHTSSDTPNLNEQKRDQAHHDSFKPVPSVPTPPKQLPPRNDGGVIDQSNAGEAHSVSKVKKEEQASVLPPSSQVQKPSVPMTGISMAMPYHHQSQAPVQFGGPNPQIQSQGMPAVSLLMPMPKPLPMGNVPQVQQQVFVPSLQPLPNHPQGIMHQGQNLSFGSQMSPQLPHQLGNMGINTSPQYSQQQGGKFAGPHKTTTVEYTHREKHEELRLDFDKKADSHSDGVTSGARSYPNVPSQAQPVQSFAASHPLNYFPSSTYSSGCLFFRPSSGHLSSSHMTPGGDRWQRATNFQQRGLIPSPQTPLQMMHKAEKKYEVAKLRGVERAKQRQLKAILKKLTPQNFEKLFEQVKSVNIDNTVTLTGAVSQIFEKALGEPTFCEMYADLCLHLAAELPDFSEDNKKITFKRLLLNKCQEEFERGEGEKEEANKDDEGEVKQTDEEREEKRVKVRRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGSYQDPDEEDIEALCKLMSTIGEMIDHPKVKEHMDAYFERMKLLSNNMNLSSRVRFMLKDAIDLRKNNWQLKRKVEGPKKIEQVHRDAAQERQAQTGRLGRGPGNSASSRRMPMDFSLRGSSMLSPPNTPMGLRGLSAQVRSGGSQDVRQDDRLSYEGRNLSIPLPQRPLGDDSITLGPQGGLARGMSFRGPAVIPSSPVPDVLPGADSRRVASGPNGYSNSSQRTLYSSRDQMPRYSTDRFAGPTAHDQSAVQDRNINYGNRELRNAGWVLERPVATLPPGVQGCGVSENALSETVWPEGRLQGMSMAAIKEYYSLLVGTWDCFTLIFLKDAEVNAAYRKDTERDLLAKLLVSLTQDGTLSQAQLIHGFESVLSGLEDAVNDAPRAPEFLGQIFARVVMKNVVLLKEIGQLLHEGGEEPGQLLEIGLAADVLGSILEAIKMYKGDAVLSEIRSNSNLRLETFRPPHPIISRKLENFI 1069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0528 1069 MobiDBLite consensus disorder prediction 112 187 - -
Lele39g0528 1069 ProSiteProfiles MI domain profile. 880 1005 IPR003891 -
Lele39g0528 1069 MobiDBLite consensus disorder prediction 805 827 - -
Lele39g0528 1069 SUPERFAMILY ARM repeat 893 1066 IPR016024 -
Lele39g0528 1069 MobiDBLite consensus disorder prediction 58 93 - -
Lele39g0528 1069 MobiDBLite consensus disorder prediction 528 553 - -
Lele39g0528 1069 FunFam Eukaryotic translation initiation factor 4G 919 1068 - -
Lele39g0528 1069 MobiDBLite consensus disorder prediction 666 683 - -
Lele39g0528 1069 Gene3D - 891 1069 - -
Lele39g0528 1069 SMART if4_15 437 659 IPR003890 GO:0003723|GO:0005515
Lele39g0528 1069 Gene3D - 437 672 - -
Lele39g0528 1069 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 58 1069 IPR045208 GO:0003743
Lele39g0528 1069 Coils Coil 519 539 - -
Lele39g0528 1069 MobiDBLite consensus disorder prediction 328 347 - -
Lele39g0528 1069 MobiDBLite consensus disorder prediction 58 72 - -
Lele39g0528 1069 MobiDBLite consensus disorder prediction 666 847 - -
Lele39g0528 1069 SUPERFAMILY ARM repeat 435 661 IPR016024 -
Lele39g0528 1069 Pfam MIF4G domain 437 659 IPR003890 GO:0003723|GO:0005515
Lele39g0528 1069 MobiDBLite consensus disorder prediction 79 93 - -
Lele39g0528 1069 Pfam MA3 domain 931 993 IPR003891 -
Lele39g0528 1069 FunFam Eukaryotic translation initiation factor 4G 437 672 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0528 Lele-ChrLele39 4568026 4576897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0528 65 389 Eukaryotic Initiation Factors Gene Family AT3G60240 38.261 2.21e-47 183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g0528 39 4568026 4576897 Lele39g0528 39 4568026 4576897 ECH
Lele37g0883 37 18668527 18673361 Lele39g0528 39 4568026 4576897 hybridization
Lele38g0815 38 19861458 19869543 Lele39g0528 39 4568026 4576897 hybridization