Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0510 ATGGCTTCGCCTTCTTCGCCGGTGAATTCTACCCCTCCTCCTGATCCACCCTCCGCTGTGCCTCTACCCTTGCCGGCTCCACCGTCGTCTCGCCGTCTTCCGCCGCCATGCTGGTCTCCCGATGAGACTGTGGCTTTAATCGACGCGTATCGTGATAAGTGGTATTCCCTTGGTCGGGGTAATCTGAAGGCTACTCATTGGCAGGAGGTCGCCGATGCGGTTACGAGTCGTTGCCCAAACGCGTCTCCGCCTAAGACGGCCGTACAGTGCCGCCACAAGATGGAGAAGCTCCGTAAGCGGTACCGCACCGAGATCCAGCGTGCCCGGTCTCTACCTGTTACCCGATTCAATTCGGCGTGGGTCCATTTCAAGCGCATGGATTCTATGGAGAAAGGTCCTTCACCGGTTAAACCTGAGAACAATTCTGATAGCCCTGATGATATTGACCACGACGACGACGACGATGATCAAGATTTATACGAGGAATTTAAGAATGCTCCTAGTAATAACACGAGGAGCTTGAATAAACTGTATAGAAACGGAATTGGTGGTGGTTCTGACGGCGGCGGTGTCGGTGGAGGCGGATTTCGCATTCGAATTCCGACTGGGGTGAGTATAGCACAACCTGGGACCAAGTTTTACGGGAAACTTGCAGATCAGAAATTTAACTCGAATTCGAGCTCTGCCGCACCTAGCTCTAATTGCAACCCCAATTACGGCACAAGGATTTTGAAAGAGAGAAGCGGATTGGGGAAGAGGGAGAGAGGAGAGAGGGATCCAGTGGGAGAGATGGTGACTGCAATTAAGGTTTTAGGAGATGGGTTTGTTAGGATGGAGCAGATGAAGATGGAGATGGCAAGAGAGATTGAAACCATGAGGATGGACATGGAAATGAAACGTACTGAGATGATTTTGGAGTCTCAACAACGGATTGTTGAAGCATTCGCTAAAGCAGTTTCAGAGAAGAAGAAGAAGGCTAAGAGAATGCCATCACCTTCAGAACCATAG 1008 0.5069 MASPSSPVNSTPPPDPPSAVPLPLPAPPSSRRLPPPCWSPDETVALIDAYRDKWYSLGRGNLKATHWQEVADAVTSRCPNASPPKTAVQCRHKMEKLRKRYRTEIQRARSLPVTRFNSAWVHFKRMDSMEKGPSPVKPENNSDSPDDIDHDDDDDDQDLYEEFKNAPSNNTRSLNKLYRNGIGGGSDGGGVGGGGFRIRIPTGVSIAQPGTKFYGKLADQKFNSNSSSAAPSSNCNPNYGTRILKERSGLGKRERGERDPVGEMVTAIKVLGDGFVRMEQMKMEMAREIETMRMDMEMKRTEMILESQQRIVEAFAKAVSEKKKKAKRMPSPSEP 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0510 335 MobiDBLite consensus disorder prediction 7 35 - -
Lele39g0510 335 MobiDBLite consensus disorder prediction 127 173 - -
Lele39g0510 335 Pfam Myb/SANT-like DNA-binding domain 36 129 IPR044822 -
Lele39g0510 335 MobiDBLite consensus disorder prediction 145 160 - -
Lele39g0510 335 MobiDBLite consensus disorder prediction 1 37 - -
Lele39g0510 335 FunFam Trihelix transcription factor ASIL2 38 103 - -
Lele39g0510 335 Coils Coil 91 111 - -
Lele39g0510 335 Gene3D - 38 103 - -
Lele39g0510 335 SMART 118neu2 45 134 IPR006578 -
Lele39g0510 335 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 14 321 IPR044823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0510 Lele-ChrLele39 4227033 4228040 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0510 37 129 Trihelix Transcription Factor Family AT3G14180 38.710 2.61e-17 80.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele39g0510 Myb_DNA-bind_4 9.8e-21 CL0123